Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BEST1O76090 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BEST1O76090 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
BEST1O76090 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.39■■□□□ 1.01
BEST1O76090 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
BEST1O76090 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
BEST1O76090 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.38■■□□□ 1.01
BEST1O76090 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
BEST1O76090 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.38■■□□□ 1.01
BEST1O76090 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.38■■□□□ 1.01
BEST1O76090 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
BEST1O76090 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BEST1O76090 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
BEST1O76090 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
BEST1O76090 ABHD17AP1-201ENST00000358206 933 ntBASIC21.38■■□□□ 1.01
BEST1O76090 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BEST1O76090 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
BEST1O76090 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
BEST1O76090 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
BEST1O76090 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.38■■□□□ 1.01
BEST1O76090 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
BEST1O76090 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
BEST1O76090 HLA-B-256ENST00000639848 1089 ntBASIC21.38■■□□□ 1.01
BEST1O76090 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
BEST1O76090 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BEST1O76090 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BEST1O76090 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BEST1O76090 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BEST1O76090 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BEST1O76090 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.38■■□□□ 1.01
BEST1O76090 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
BEST1O76090 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
BEST1O76090 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
BEST1O76090 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
BEST1O76090 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
BEST1O76090 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
BEST1O76090 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.37■■□□□ 1.01
BEST1O76090 AC060766.5-201ENST00000590539 871 ntBASIC21.37■■□□□ 1.01
BEST1O76090 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.37■■□□□ 1.01
BEST1O76090 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
BEST1O76090 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BEST1O76090 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BEST1O76090 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BEST1O76090 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.36■■□□□ 1.01
BEST1O76090 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BEST1O76090 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BEST1O76090 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BEST1O76090 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
BEST1O76090 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
BEST1O76090 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.36■■□□□ 1.01
BEST1O76090 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BEST1O76090 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BEST1O76090 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
BEST1O76090 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.36■■□□□ 1.01
BEST1O76090 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.36■■□□□ 1.01
BEST1O76090 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
BEST1O76090 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.36■■□□□ 1.01
BEST1O76090 UNC93B5-201ENST00000530315 699 ntBASIC21.36■■□□□ 1.01
BEST1O76090 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.36■■□□□ 1.01
BEST1O76090 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.36■■□□□ 1.01
BEST1O76090 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
BEST1O76090 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BEST1O76090 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
BEST1O76090 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BEST1O76090 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
BEST1O76090 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.36■■□□□ 1.01
BEST1O76090 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
BEST1O76090 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BEST1O76090 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
BEST1O76090 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
BEST1O76090 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BEST1O76090 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.35■■□□□ 1.01
BEST1O76090 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
BEST1O76090 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.35■■□□□ 1.01
BEST1O76090 PNMA6B-201ENST00000538162 1200 ntBASIC21.35■■□□□ 1.01
BEST1O76090 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.35■■□□□ 1.01
BEST1O76090 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
BEST1O76090 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
BEST1O76090 AC092368.3-202ENST00000574180 1591 ntBASIC21.35■■□□□ 1.01
BEST1O76090 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BEST1O76090 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BEST1O76090 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BEST1O76090 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
BEST1O76090 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.34■■□□□ 1.01
BEST1O76090 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
BEST1O76090 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BEST1O76090 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
BEST1O76090 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.34■■□□□ 1.01
BEST1O76090 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.34■■□□□ 1.01
BEST1O76090 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
BEST1O76090 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BEST1O76090 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
BEST1O76090 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
BEST1O76090 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.34■■□□□ 1.01
BEST1O76090 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
BEST1O76090 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.34■■□□□ 1.01
BEST1O76090 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.34■■□□□ 1.01
BEST1O76090 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
BEST1O76090 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.33■■□□□ 1.01
BEST1O76090 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms