Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRNP200O75643 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SNRNP200O75643 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNRNP200O75643 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRNP200O75643 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SNRNP200O75643 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRNP200O75643 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRNP200O75643 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRNP200O75643 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRNP200O75643 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.49■□□□□ 0.71
SNRNP200O75643 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRNP200O75643 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.49■□□□□ 0.71
SNRNP200O75643 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.49■□□□□ 0.71
SNRNP200O75643 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRNP200O75643 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRNP200O75643 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNRNP200O75643 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
SNRNP200O75643 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.49■□□□□ 0.71
SNRNP200O75643 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
SNRNP200O75643 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNRNP200O75643 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SNRNP200O75643 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNRNP200O75643 CD99P1-205ENST00000527459 561 ntBASIC19.48■□□□□ 0.71
SNRNP200O75643 AP003097.1-201ENST00000530657 1135 ntBASIC19.48■□□□□ 0.71
SNRNP200O75643 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SNRNP200O75643 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNRNP200O75643 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SNRNP200O75643 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNRNP200O75643 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNRNP200O75643 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SNRNP200O75643 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.48■□□□□ 0.71
SNRNP200O75643 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SNRNP200O75643 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
SNRNP200O75643 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SNRNP200O75643 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
SNRNP200O75643 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SNRNP200O75643 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNRNP200O75643 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNRNP200O75643 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNRNP200O75643 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNRNP200O75643 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SNRNP200O75643 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.47■□□□□ 0.71
SNRNP200O75643 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNRNP200O75643 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SNRNP200O75643 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SNRNP200O75643 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNRNP200O75643 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNRNP200O75643 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNRNP200O75643 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SNRNP200O75643 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.47■□□□□ 0.71
SNRNP200O75643 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNRNP200O75643 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNRNP200O75643 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNRNP200O75643 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.46■□□□□ 0.71
SNRNP200O75643 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNRNP200O75643 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNRNP200O75643 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNRNP200O75643 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNRNP200O75643 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNRNP200O75643 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
SNRNP200O75643 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNRNP200O75643 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.46■□□□□ 0.71
SNRNP200O75643 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.46■□□□□ 0.71
SNRNP200O75643 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SNRNP200O75643 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.46■□□□□ 0.71
SNRNP200O75643 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.46■□□□□ 0.71
SNRNP200O75643 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
SNRNP200O75643 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNRNP200O75643 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNRNP200O75643 TSPY20P-201ENST00000450910 630 ntBASIC19.46■□□□□ 0.71
SNRNP200O75643 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SNRNP200O75643 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNRNP200O75643 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.45■□□□□ 0.7
SNRNP200O75643 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNRNP200O75643 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.45■□□□□ 0.7
SNRNP200O75643 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.45■□□□□ 0.7
SNRNP200O75643 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNRNP200O75643 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNRNP200O75643 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNRNP200O75643 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SNRNP200O75643 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.45■□□□□ 0.7
SNRNP200O75643 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SNRNP200O75643 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNRNP200O75643 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNRNP200O75643 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SNRNP200O75643 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNRNP200O75643 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.45■□□□□ 0.7
SNRNP200O75643 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.45■□□□□ 0.7
SNRNP200O75643 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNRNP200O75643 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNRNP200O75643 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.45■□□□□ 0.7
SNRNP200O75643 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNRNP200O75643 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNRNP200O75643 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNRNP200O75643 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNRNP200O75643 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNRNP200O75643 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNRNP200O75643 AC092667.1-201ENST00000434301 2586 ntBASIC19.44■□□□□ 0.7
SNRNP200O75643 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.44■□□□□ 0.7
SNRNP200O75643 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms