Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SPTLC1O15269 AC092368.3-202ENST00000574180 1591 ntBASIC21.78■■□□□ 1.08
SPTLC1O15269 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SPTLC1O15269 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPTLC1O15269 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.77■■□□□ 1.08
SPTLC1O15269 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SPTLC1O15269 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.77■■□□□ 1.08
SPTLC1O15269 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.77■■□□□ 1.08
SPTLC1O15269 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SPTLC1O15269 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SPTLC1O15269 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SPTLC1O15269 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
SPTLC1O15269 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SPTLC1O15269 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.77■■□□□ 1.08
SPTLC1O15269 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SPTLC1O15269 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.77■■□□□ 1.08
SPTLC1O15269 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SPTLC1O15269 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SPTLC1O15269 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SPTLC1O15269 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.77■■□□□ 1.08
SPTLC1O15269 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
SPTLC1O15269 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SPTLC1O15269 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPTLC1O15269 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SPTLC1O15269 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SPTLC1O15269 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPTLC1O15269 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SPTLC1O15269 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.76■■□□□ 1.07
SPTLC1O15269 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SPTLC1O15269 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPTLC1O15269 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SPTLC1O15269 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPTLC1O15269 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPTLC1O15269 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SPTLC1O15269 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.76■■□□□ 1.07
SPTLC1O15269 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.76■■□□□ 1.07
SPTLC1O15269 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.76■■□□□ 1.07
SPTLC1O15269 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.76■■□□□ 1.07
SPTLC1O15269 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SPTLC1O15269 AL137060.1-201ENST00000618151 2648 ntBASIC21.76■■□□□ 1.07
SPTLC1O15269 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPTLC1O15269 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPTLC1O15269 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPTLC1O15269 AC006128.1-201ENST00000624704 1661 ntBASIC21.75■■□□□ 1.07
SPTLC1O15269 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPTLC1O15269 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPTLC1O15269 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPTLC1O15269 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPTLC1O15269 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPTLC1O15269 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.75■■□□□ 1.07
SPTLC1O15269 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.75■■□□□ 1.07
SPTLC1O15269 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.75■■□□□ 1.07
SPTLC1O15269 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.75■■□□□ 1.07
SPTLC1O15269 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.75■■□□□ 1.07
SPTLC1O15269 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.75■■□□□ 1.07
SPTLC1O15269 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.75■■□□□ 1.07
SPTLC1O15269 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.75■■□□□ 1.07
SPTLC1O15269 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SPTLC1O15269 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPTLC1O15269 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SPTLC1O15269 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPTLC1O15269 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.74■■□□□ 1.07
SPTLC1O15269 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.74■■□□□ 1.07
SPTLC1O15269 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPTLC1O15269 AC098590.1-201ENST00000468126 897 ntBASIC21.74■■□□□ 1.07
SPTLC1O15269 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.74■■□□□ 1.07
SPTLC1O15269 AC026366.1-201ENST00000488803 879 ntBASIC21.74■■□□□ 1.07
SPTLC1O15269 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.74■■□□□ 1.07
SPTLC1O15269 AP003097.1-201ENST00000530657 1135 ntBASIC21.74■■□□□ 1.07
SPTLC1O15269 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.74■■□□□ 1.07
SPTLC1O15269 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPTLC1O15269 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPTLC1O15269 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
SPTLC1O15269 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SPTLC1O15269 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SPTLC1O15269 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SPTLC1O15269 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPTLC1O15269 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.73■■□□□ 1.07
SPTLC1O15269 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.73■■□□□ 1.07
SPTLC1O15269 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPTLC1O15269 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPTLC1O15269 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPTLC1O15269 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.73■■□□□ 1.07
SPTLC1O15269 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPTLC1O15269 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPTLC1O15269 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPTLC1O15269 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPTLC1O15269 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SPTLC1O15269 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
SPTLC1O15269 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.73■■□□□ 1.07
SPTLC1O15269 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.73■■□□□ 1.07
SPTLC1O15269 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SPTLC1O15269 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.73■■□□□ 1.07
SPTLC1O15269 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
SPTLC1O15269 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SPTLC1O15269 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SPTLC1O15269 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SPTLC1O15269 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SPTLC1O15269 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SPTLC1O15269 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms