Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	PHD1	YKL043W	1101 nt		3.39	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	YPR108W-A	YPR108W-A	213 nt		3.39	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	FLO1	YAR050W	4614 nt		3.39	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	LSO2	YGR169C-A	279 nt		3.38	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	YML007C-A	YML007C-A	111 nt		3.38	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	RPS8A	YBL072C	603 nt		3.38	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	YPR092W	YPR092W	306 nt		3.38	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	NCL1	YBL024W	2055 nt		3.38	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	CDC27	YBL084C	2277 nt		3.38	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	MET5	YJR137C	4329 nt		3.38	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	YDR034C-D	YDR034C-D	5313 nt		3.38	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	MIT1	YEL007W	2001 nt		3.37	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	FRE2	YKL220C	2136 nt		3.37	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	RPL20A	YMR242C	519 nt		3.37	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	KEL2	YGR238C	2649 nt		3.37	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	RSN1	YMR266W	2862 nt		3.37	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	YLR255C	YLR255C	354 nt		3.36	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	YBR131C-A	YBR131C-A	90 nt		3.36	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	PRP42	YDR235W	1635 nt		3.36	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	SNU114	YKL173W	3027 nt		3.35	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	SSS1	YDR086C	243 nt		3.35	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	SNU13	YEL026W	381 nt		3.35	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	TRX1	YLR043C	312 nt		3.35	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	RPL20B	YOR312C	519 nt		3.35	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	SNC2	YOR327C	348 nt		3.35	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	SWA2	YDR320C	2007 nt		3.35	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	COG3	YER157W	2406 nt		3.35	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	POL2	YNL262W	6669 nt		3.35	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	PSY2	YNL201C	2577 nt		3.34	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	YML037C	YML037C	1023 nt		3.34	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	GIS2	YNL255C	462 nt		3.34	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	CDC20	YGL116W	1833 nt		3.34	□□□□□ -1.87
TY4B-P	A0A0B7P3V8	SOK1	YDR006C	2706 nt		3.34	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	STT4	YLR305C	5703 nt		3.33	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	snR74	snR74	88 nt		3.33	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	YGL024W	YGL024W	336 nt		3.33	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	YOR161W-B	YOR161W-B	261 nt		3.33	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	TIM12	YBR091C	330 nt		3.33	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	LRG1	YDL240W	3054 nt		3.33	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	NET1	YJL076W	3570 nt		3.33	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	RAX2	YLR084C	3663 nt		3.32	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	APC11	YDL008W	498 nt		3.32	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	PSF1	YDR013W	627 nt		3.32	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	YDR544C	YDR544C	429 nt		3.32	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	SUP56	tL(CAA)A	82 nt		3.32	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	SUP53	tL(CAA)C	82 nt		3.32	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	tL(CAA)D	tL(CAA)D	82 nt		3.32	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	tL(CAA)G1	tL(CAA)G1	82 nt		3.32	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	SUP54	tL(CAA)G2	82 nt		3.32	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	tL(CAA)G3	tL(CAA)G3	82 nt		3.32	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	tL(CAA)K	tL(CAA)K	82 nt		3.32	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	tL(CAA)L	tL(CAA)L	82 nt		3.32	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	tL(CAA)M	tL(CAA)M	82 nt		3.32	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	tL(CAA)N	tL(CAA)N	82 nt		3.32	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	INA22	YIR024C	651 nt		3.32	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	FPR1	YNL135C	345 nt		3.32	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	PEX8	YGR077C	1770 nt		3.32	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	VPS53	YJL029C	2469 nt		3.32	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	RGR1	YLR071C	3249 nt		3.32	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	KAR3	YPR141C	2190 nt		3.31	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	DFG16	YOR030W	1860 nt		3.31	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	YDR286C	YDR286C	345 nt		3.31	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	ERP6	YGL002W	651 nt		3.31	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	YDL247W-A	YDL247W-A	75 nt		3.3	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	YDR193W	YDR193W	399 nt		3.3	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	YIR030W-A	YIR030W-A	384 nt		3.3	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	RPS21A	YKR057W	264 nt		3.3	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	VPS54	YDR027C	2670 nt		3.3	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	PKH1	YDR490C	2301 nt		3.3	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	RAD2	YGR258C	3096 nt		3.29	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	YGL069C	YGL069C	465 nt		3.29	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	YHR210C	YHR210C	1026 nt		3.29	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	YIL071W-A	YIL071W-A	477 nt		3.29	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	NUT2	YPR168W	474 nt		3.29	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	YDR210W-B	YDR210W-B	5313 nt		3.29	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	YDR261W-B	YDR261W-B	5313 nt		3.29	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	YFL002W-A	YFL002W-A	5313 nt		3.29	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	YGR161W-B	YGR161W-B	5313 nt		3.29	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	YLR410W-B	YLR410W-B	5313 nt		3.29	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	YCL019W	YCL019W	5313 nt		3.29	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	DOT6	YER088C	2013 nt		3.29	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	MET6	YER091C	2304 nt		3.28	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	STE23	YLR389C	3084 nt		3.28	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	ULI1	YFR026C	510 nt		3.28	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	YMR31	YFR049W	372 nt		3.28	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	YMR326C	YMR326C	309 nt		3.28	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	YPR002C-A	YPR002C-A	198 nt		3.28	□□□□□ -1.88
TY4B-P	A0A0B7P3V8	GIN4	YDR507C	3429 nt		3.27	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	RAM2	YKL019W	951 nt		3.27	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	AUS1	YOR011W	4185 nt		3.27	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	RIF1	YBR275C	5751 nt		3.27	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	GUP1	YGL084C	1683 nt		3.27	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	YOL057W	YOL057W	2136 nt		3.26	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	AI2	Q0055	2565 nt		3.26	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	FUN30	YAL019W	3396 nt		3.26	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	SPT21	YMR179W	2277 nt		3.26	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	MUK1	YPL070W	1839 nt		3.26	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	ALK2	YBL009W	2031 nt		3.26	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	TRM2	YKR056W	1920 nt		3.25	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	TMN3	YER113C	2121 nt		3.25	□□□□□ -1.89

Retrieved 100 of 7,029 protein–RNA pairs in 73.4 ms