Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV17A0A0B4J275 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TRAV17A0A0B4J275 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV17A0A0B4J275 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRAV17A0A0B4J275 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV17A0A0B4J275 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
TRAV17A0A0B4J275 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.46■□□□□ 0.55
TRAV17A0A0B4J275 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.46■□□□□ 0.55
TRAV17A0A0B4J275 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAV17A0A0B4J275 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV17A0A0B4J275 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV17A0A0B4J275 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TRAV17A0A0B4J275 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV17A0A0B4J275 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.46■□□□□ 0.55
TRAV17A0A0B4J275 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV17A0A0B4J275 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV17A0A0B4J275 KRT17P2-201ENST00000300992 1314 ntBASIC18.46■□□□□ 0.55
TRAV17A0A0B4J275 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
TRAV17A0A0B4J275 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV17A0A0B4J275 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV17A0A0B4J275 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV17A0A0B4J275 AC027702.1-201ENST00000563810 1770 ntBASIC18.45■□□□□ 0.54
TRAV17A0A0B4J275 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV17A0A0B4J275 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRAV17A0A0B4J275 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV17A0A0B4J275 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV17A0A0B4J275 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.45■□□□□ 0.54
TRAV17A0A0B4J275 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRAV17A0A0B4J275 AC023632.3-201ENST00000521633 145 ntBASIC18.45■□□□□ 0.54
TRAV17A0A0B4J275 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.45■□□□□ 0.54
TRAV17A0A0B4J275 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.45■□□□□ 0.54
TRAV17A0A0B4J275 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.45■□□□□ 0.54
TRAV17A0A0B4J275 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.45■□□□□ 0.54
TRAV17A0A0B4J275 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV17A0A0B4J275 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV17A0A0B4J275 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV17A0A0B4J275 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
TRAV17A0A0B4J275 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV17A0A0B4J275 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TRAV17A0A0B4J275 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.45■□□□□ 0.54
TRAV17A0A0B4J275 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV17A0A0B4J275 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV17A0A0B4J275 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
TRAV17A0A0B4J275 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV17A0A0B4J275 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV17A0A0B4J275 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV17A0A0B4J275 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TRAV17A0A0B4J275 KRT8P36-201ENST00000489121 1440 ntBASIC18.43■□□□□ 0.54
TRAV17A0A0B4J275 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV17A0A0B4J275 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV17A0A0B4J275 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV17A0A0B4J275 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.43■□□□□ 0.54
TRAV17A0A0B4J275 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV17A0A0B4J275 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV17A0A0B4J275 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.43■□□□□ 0.54
TRAV17A0A0B4J275 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.43■□□□□ 0.54
TRAV17A0A0B4J275 AL049637.2-201ENST00000641778 930 ntBASIC18.43■□□□□ 0.54
TRAV17A0A0B4J275 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV17A0A0B4J275 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV17A0A0B4J275 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV17A0A0B4J275 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV17A0A0B4J275 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV17A0A0B4J275 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV17A0A0B4J275 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV17A0A0B4J275 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV17A0A0B4J275 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV17A0A0B4J275 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.42■□□□□ 0.54
TRAV17A0A0B4J275 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV17A0A0B4J275 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV17A0A0B4J275 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV17A0A0B4J275 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV17A0A0B4J275 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TRAV17A0A0B4J275 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV17A0A0B4J275 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms