Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 AC053503.5-201ENST00000601508 636 ntBASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV8-1A0A0A6YYK1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 AL136162.1-201ENST00000607711 1078 ntBASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 AC098818.2-201ENST00000564925 2320 ntBASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-1A0A0A6YYK1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-1A0A0A6YYK1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-1A0A0A6YYK1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-1A0A0A6YYK1 AC120498.9-201ENST00000339021 3867 ntBASIC15.39■□□□□ 0.05
TRAV8-1A0A0A6YYK1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-1A0A0A6YYK1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-1A0A0A6YYK1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-1A0A0A6YYK1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-1A0A0A6YYK1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-1A0A0A6YYK1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRAV8-1A0A0A6YYK1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV8-1A0A0A6YYK1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-1A0A0A6YYK1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-1A0A0A6YYK1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV8-1A0A0A6YYK1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-1A0A0A6YYK1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRAV8-1A0A0A6YYK1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-1A0A0A6YYK1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV8-1A0A0A6YYK1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-1A0A0A6YYK1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-1A0A0A6YYK1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 AC099791.1-201ENST00000416440 715 ntBASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 AC018445.3-201ENST00000624177 1945 ntBASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 AC135279.3-201ENST00000610945 1311 ntBASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV8-1A0A0A6YYK1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV8-1A0A0A6YYK1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 157.2 ms