Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CCDC113-202ENST00000443128 5110 ntTSL 2 BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 AC100771.2-201ENST00000525833 1350 ntTSL 3 BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 NBPF9-202ENST00000584027 5034 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 JADE1-202ENST00000413543 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 GANC-206ENST00000566442 2512 ntTSL 2 BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 FPR3-202ENST00000595991 2222 ntAPPRIS P1 TSL 4 BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 DNMBP-204ENST00000636706 5437 ntTSL 2 BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 NCAPH-201ENST00000240423 2763 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 GPR107-202ENST00000372406 7353 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 CCDC149-204ENST00000504487 3869 ntAPPRIS ALT2 TSL 2 BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 MLYCD-201ENST00000262430 13038 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 IL4-201ENST00000231449 616 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 RN7SKP75-201ENST00000363070 296 ntBASIC8.88□□□□□ -0.99
LMO3Q8TAP4 ARR3-202ENST00000374495 1298 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 GCG-201ENST00000375497 799 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 TRBV7-5-201ENST00000390382 345 ntBASIC8.88□□□□□ -0.99
LMO3Q8TAP4 AC104455.1-201ENST00000417340 736 ntBASIC8.88□□□□□ -0.99
LMO3Q8TAP4 AC114760.1-201ENST00000420310 652 ntBASIC8.88□□□□□ -0.99
LMO3Q8TAP4 AL031733.1-201ENST00000422817 455 ntBASIC8.88□□□□□ -0.99
LMO3Q8TAP4 AC239367.1-201ENST00000439389 936 ntBASIC8.88□□□□□ -0.99
LMO3Q8TAP4 ASS1P4-201ENST00000439462 1234 ntBASIC8.88□□□□□ -0.99
LMO3Q8TAP4 AL160408.4-201ENST00000441360 933 ntTSL 2 BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 OR7E109P-201ENST00000445529 855 ntBASIC8.88□□□□□ -0.99
LMO3Q8TAP4 RN7SL135P-201ENST00000490144 278 ntBASIC8.88□□□□□ -0.99
LMO3Q8TAP4 RPS20-204ENST00000519606 424 ntTSL 3 BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 AC104031.1-201ENST00000527726 372 ntTSL 2 BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 GSG1-206ENST00000537302 1028 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 AL133304.3-201ENST00000550089 477 ntTSL 3 BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 CYP19A1-210ENST00000557858 832 ntTSL 2 BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 RN7SL670P-201ENST00000577235 294 ntBASIC8.88□□□□□ -0.99
LMO3Q8TAP4 AC025198.1-201ENST00000578331 419 ntBASIC8.88□□□□□ -0.99
LMO3Q8TAP4 FAM30B-201ENST00000611556 397 ntBASIC8.88□□□□□ -0.99
LMO3Q8TAP4 AC010542.5-201ENST00000612427 382 ntBASIC8.88□□□□□ -0.99
LMO3Q8TAP4 AC131159.2-201ENST00000613236 702 ntBASIC8.88□□□□□ -0.99
LMO3Q8TAP4 AC027139.2-201ENST00000615639 448 ntBASIC8.88□□□□□ -0.99
LMO3Q8TAP4 AL031772.1-216ENST00000619494 697 ntTSL 5 BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 IL4-204ENST00000622422 717 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 AL109653.2-201ENST00000625029 1065 ntBASIC8.88□□□□□ -0.99
LMO3Q8TAP4 OLMALINC-206ENST00000641799 1195 ntBASIC8.88□□□□□ -0.99
LMO3Q8TAP4 RPS20-201ENST00000009589 626 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 ZNF197-205ENST00000396058 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 AF121897.1-201ENST00000411867 3980 ntBASIC8.88□□□□□ -0.99
LMO3Q8TAP4 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 PPFIA2-204ENST00000541017 4192 ntTSL 2 BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 RWDD1-204ENST00000487832 1427 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 CDK1-203ENST00000395284 1913 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
LMO3Q8TAP4 VPS8-204ENST00000424463 2359 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 YAP1-203ENST00000524575 1638 ntTSL 2 BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 BCL9P1-201ENST00000506012 2561 ntBASIC8.87□□□□□ -0.99
LMO3Q8TAP4 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 AC091132.4-201ENST00000587960 2262 ntBASIC8.87□□□□□ -0.99
LMO3Q8TAP4 DRP2-203ENST00000402866 7018 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 YES1-205ENST00000584307 4639 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 MRAS-210ENST00000614350 4377 ntTSL 2 BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 C1orf146-202ENST00000370375 830 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 AC096664.1-201ENST00000393996 778 ntBASIC8.87□□□□□ -0.99
LMO3Q8TAP4 TRIB2-203ENST00000405331 830 ntTSL 2 BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 EEF1A1P31-201ENST00000415978 1131 ntBASIC8.87□□□□□ -0.99
LMO3Q8TAP4 AKR1B1P8-201ENST00000418396 936 ntBASIC8.87□□□□□ -0.99
LMO3Q8TAP4 AC012506.4-202ENST00000430051 572 ntTSL 5 BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 AL008638.1-201ENST00000430468 473 ntTSL 2 BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 AC092568.1-201ENST00000440950 1284 ntBASIC8.87□□□□□ -0.99
LMO3Q8TAP4 FTH1P27-201ENST00000449509 551 ntBASIC8.87□□□□□ -0.99
LMO3Q8TAP4 AC012501.1-201ENST00000454312 555 ntTSL 4 BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 RN7SL854P-201ENST00000459767 295 ntBASIC8.87□□□□□ -0.99
LMO3Q8TAP4 RN7SL403P-201ENST00000481783 305 ntBASIC8.87□□□□□ -0.99
LMO3Q8TAP4 RN7SL215P-201ENST00000487718 298 ntBASIC8.87□□□□□ -0.99
LMO3Q8TAP4 SNRPCP8-201ENST00000514820 211 ntBASIC8.87□□□□□ -0.99
LMO3Q8TAP4 ELL2P2-201ENST00000515135 694 ntBASIC8.87□□□□□ -0.99
LMO3Q8TAP4 NACA2-201ENST00000521764 777 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 AC100818.1-202ENST00000523748 578 ntTSL 4 BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 CRYAB-215ENST00000533971 981 ntTSL 2 BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 TMEM269-202ENST00000536543 983 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 NOVA1-AS1-201ENST00000547786 818 ntTSL 3 BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 AC104046.1-201ENST00000559487 406 ntBASIC8.87□□□□□ -0.99
LMO3Q8TAP4 HIGD1B-203ENST00000587021 457 ntTSL 2 BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 GMFG-210ENST00000601387 497 ntTSL 3 BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 AL121917.2-201ENST00000605044 390 ntBASIC8.87□□□□□ -0.99
LMO3Q8TAP4 AC244093.5-201ENST00000619606 718 ntTSL 4 BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 FAM107B-201ENST00000181796 3785 ntTSL 2 BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 CNGA2-201ENST00000329903 2834 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 TMEM213-203ENST00000442682 4167 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 SPATA31D5P-201ENST00000376459 4784 ntBASIC8.87□□□□□ -0.99
LMO3Q8TAP4 C8orf48-201ENST00000297324 1445 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 SHC4-203ENST00000537958 1447 ntTSL 2 BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 ZNF333-201ENST00000292530 4672 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
LMO3Q8TAP4 KCNIP4-204ENST00000382150 1645 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms