Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
MTHFRP42898 MCTP1-201ENST00000312216 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
MTHFRP42898 ERC1-213ENST00000543086 9241 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
MTHFRP42898 LINC02292-201ENST00000554522 1701 ntTSL 2 BASIC8.97□□□□□ -0.97
MTHFRP42898 NBPF19-204ENST00000611931 2051 ntTSL 5 BASIC8.96□□□□□ -0.97
MTHFRP42898 NBPF14-205ENST00000614329 2051 ntTSL 5 BASIC8.96□□□□□ -0.97
MTHFRP42898 NBPF26-205ENST00000615219 2051 ntTSL 5 BASIC8.96□□□□□ -0.97
MTHFRP42898 NBPF14-207ENST00000616120 2051 ntTSL 5 BASIC8.96□□□□□ -0.97
MTHFRP42898 NBPF12-207ENST00000617864 2051 ntTSL 5 BASIC8.96□□□□□ -0.97
MTHFRP42898 NBPF20-204ENST00000620821 2051 ntTSL 5 BASIC8.96□□□□□ -0.97
MTHFRP42898 SEPT4-202ENST00000317268 1784 ntAPPRIS P4 TSL 1 (best) BASIC8.96□□□□□ -0.97
MTHFRP42898 SLC2A3P2-201ENST00000331747 1480 ntBASIC8.96□□□□□ -0.97
MTHFRP42898 FMO10P-201ENST00000455032 1493 ntBASIC8.96□□□□□ -0.97
MTHFRP42898 HCRTR2-201ENST00000370862 1837 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
MTHFRP42898 RUNX1T1-250ENST00000614812 7483 ntAPPRIS P3 TSL 5 BASIC8.96□□□□□ -0.97
MTHFRP42898 MORN3-201ENST00000355329 3803 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
MTHFRP42898 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
MTHFRP42898 ITIH2-201ENST00000358415 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
MTHFRP42898 TARS-204ENST00000502553 2534 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
MTHFRP42898 IBSP-201ENST00000226284 1546 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
MTHFRP42898 AC024610.2-205ENST00000584758 1567 ntTSL 5 BASIC8.96□□□□□ -0.97
MTHFRP42898 TULP3-201ENST00000397132 1951 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
MTHFRP42898 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
MTHFRP42898 FAM218BP-201ENST00000408897 458 ntBASIC8.96□□□□□ -0.98
MTHFRP42898 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
MTHFRP42898 AL356387.1-201ENST00000426321 476 ntTSL 3 BASIC8.96□□□□□ -0.98
MTHFRP42898 TXNP3-201ENST00000454560 301 ntBASIC8.96□□□□□ -0.98
MTHFRP42898 ENPP7P3-201ENST00000509123 241 ntBASIC8.96□□□□□ -0.98
MTHFRP42898 RNA5SP159-201ENST00000517161 103 ntBASIC8.96□□□□□ -0.98
MTHFRP42898 AC020688.1-201ENST00000519282 1248 ntBASIC8.96□□□□□ -0.98
MTHFRP42898 AC012038.1-201ENST00000551279 552 ntTSL 4 BASIC8.96□□□□□ -0.98
MTHFRP42898 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
MTHFRP42898 RN7SL381P-201ENST00000577658 298 ntBASIC8.96□□□□□ -0.98
MTHFRP42898 AC011444.4-201ENST00000586415 418 ntBASIC8.96□□□□□ -0.98
MTHFRP42898 LINC00674-202ENST00000590734 160 ntBASIC8.96□□□□□ -0.98
MTHFRP42898 AC011476.3-201ENST00000593060 786 ntTSL 5 BASIC8.96□□□□□ -0.98
MTHFRP42898 BNIP3P15-201ENST00000604600 301 ntBASIC8.96□□□□□ -0.98
MTHFRP42898 ST13-207ENST00000620312 944 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
MTHFRP42898 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC8.96□□□□□ -0.98
MTHFRP42898 MIR193BHG-210ENST00000641327 515 ntBASIC8.96□□□□□ -0.98
MTHFRP42898 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
MTHFRP42898 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
MTHFRP42898 ZNF233-201ENST00000391958 2784 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
MTHFRP42898 MEF2C-221ENST00000514015 2772 ntTSL 5 BASIC8.96□□□□□ -0.98
MTHFRP42898 AMPD3-208ENST00000528723 2753 ntTSL 2 BASIC8.96□□□□□ -0.98
MTHFRP42898 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
MTHFRP42898 LINC01194-202ENST00000505877 1319 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
MTHFRP42898 FBXL13-202ENST00000379305 2478 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
MTHFRP42898 AC138869.3-201ENST00000563960 2486 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
MTHFRP42898 CALCR-205ENST00000421592 3626 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
MTHFRP42898 PALM2-AKAP2-202ENST00000374530 7507 ntTSL 2 BASIC8.96□□□□□ -0.98
MTHFRP42898 ATG4A-202ENST00000345734 2129 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
MTHFRP42898 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
MTHFRP42898 KCND1-202ENST00000376477 3306 ntTSL 2 BASIC8.96□□□□□ -0.98
MTHFRP42898 LINC02009-201ENST00000635852 2951 ntTSL 3 BASIC8.96□□□□□ -0.98
MTHFRP42898 KIF23-202ENST00000352331 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
MTHFRP42898 TMEM116-213ENST00000550831 1446 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
MTHFRP42898 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC8.96□□□□□ -0.98
MTHFRP42898 FAM196A-202ENST00000522781 4403 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
MTHFRP42898 AC016205.1-201ENST00000591629 2306 ntTSL 2 BASIC8.96□□□□□ -0.98
MTHFRP42898 GAB3-202ENST00000369575 4718 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
MTHFRP42898 USP2-AS1-201ENST00000498979 2486 ntTSL 3 BASIC8.95□□□□□ -0.98
MTHFRP42898 MTRNR2L1-201ENST00000540040 1553 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
MTHFRP42898 ACLY-207ENST00000590151 4309 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
MTHFRP42898 PPWD1-215ENST00000538977 2055 ntTSL 2 BASIC8.95□□□□□ -0.98
MTHFRP42898 OTOA-201ENST00000286149 3471 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
MTHFRP42898 ZNF763-201ENST00000343949 2621 ntAPPRIS P2 TSL 2 BASIC8.95□□□□□ -0.98
MTHFRP42898 TESK2-201ENST00000372084 2600 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
MTHFRP42898 DBIL5P2-202ENST00000491724 1692 ntBASIC8.95□□□□□ -0.98
MTHFRP42898 CLEC4M-204ENST00000359059 1733 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
MTHFRP42898 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
MTHFRP42898 PRAC1-201ENST00000290294 386 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
MTHFRP42898 RNU1-21P-201ENST00000363327 163 ntBASIC8.95□□□□□ -0.98
MTHFRP42898 IMPG1-203ENST00000369963 868 ntTSL 5 BASIC8.95□□□□□ -0.98
MTHFRP42898 VN2R17P-201ENST00000391712 832 ntBASIC8.95□□□□□ -0.98
MTHFRP42898 CTSLP8-201ENST00000413075 967 ntBASIC8.95□□□□□ -0.98
MTHFRP42898 UBTFL7-201ENST00000418789 1191 ntBASIC8.95□□□□□ -0.98
MTHFRP42898 AL365356.3-201ENST00000427341 657 ntTSL 3 BASIC8.95□□□□□ -0.98
MTHFRP42898 AC012494.1-201ENST00000439259 1103 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
MTHFRP42898 AP002383.1-201ENST00000439405 720 ntBASIC8.95□□□□□ -0.98
MTHFRP42898 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC8.95□□□□□ -0.98
MTHFRP42898 Z82173.1-201ENST00000453924 484 ntTSL 3 BASIC8.95□□□□□ -0.98
MTHFRP42898 RN7SL63P-201ENST00000468228 304 ntBASIC8.95□□□□□ -0.98
MTHFRP42898 AC026444.1-201ENST00000502592 496 ntBASIC8.95□□□□□ -0.98
MTHFRP42898 RPL37-205ENST00000509877 637 ntTSL 5 BASIC8.95□□□□□ -0.98
MTHFRP42898 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC8.95□□□□□ -0.98
MTHFRP42898 AC004816.1-202ENST00000557691 629 ntTSL 2 BASIC8.95□□□□□ -0.98
MTHFRP42898 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
MTHFRP42898 AKR1B10P2-201ENST00000577332 927 ntBASIC8.95□□□□□ -0.98
MTHFRP42898 AC074135.1-201ENST00000594318 581 ntTSL 4 BASIC8.95□□□□□ -0.98
MTHFRP42898 AC003956.1-201ENST00000598450 356 ntTSL 3 BASIC8.95□□□□□ -0.98
MTHFRP42898 AC005785.2-201ENST00000624655 631 ntBASIC8.95□□□□□ -0.98
MTHFRP42898 AL136967.1-201ENST00000625120 441 ntBASIC8.95□□□□□ -0.98
MTHFRP42898 AL583852.1-201ENST00000635018 572 ntTSL 4 BASIC8.95□□□□□ -0.98
MTHFRP42898 SLC9A6-209ENST00000636347 4867 ntTSL 5 BASIC8.95□□□□□ -0.98
MTHFRP42898 TGM4-201ENST00000296125 3388 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
MTHFRP42898 HAUS2-201ENST00000260372 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
MTHFRP42898 LINC00703-202ENST00000454152 2390 ntTSL 2 BASIC8.95□□□□□ -0.98
MTHFRP42898 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
MTHFRP42898 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC8.95□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms