Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 HIPK2-201ENST00000342645 2937 ntTSL 5 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 IL15-202ENST00000320650 1447 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 IGSF22-205ENST00000513874 4284 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 AC008033.3-201ENST00000612531 1407 ntBASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 AL731563.3-201ENST00000608005 3005 ntTSL 2 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 AC073621.2-201ENST00000381380 1024 ntBASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 ARF1P1-201ENST00000406466 544 ntBASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 SYNE1-AS1-201ENST00000412161 553 ntTSL 2 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 LINC00630-202ENST00000420471 838 ntTSL 3 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 AC073342.1-201ENST00000427392 592 ntTSL 5 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 RPSAP53-201ENST00000433498 862 ntBASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 AL023584.1-201ENST00000437067 349 ntTSL 3 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 LINC01422-202ENST00000438113 517 ntTSL 5 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 AC107302.1-201ENST00000467059 1032 ntBASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 DAZAP2P1-201ENST00000475212 503 ntBASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 RN7SL434P-201ENST00000495872 271 ntBASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 AC015909.1-201ENST00000509943 839 ntTSL 3 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 JRKL-AS1-201ENST00000511243 426 ntTSL 2 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 AC011676.1-201ENST00000517658 397 ntTSL 3 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 AL020996.2-202ENST00000527604 334 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 AC007751.2-201ENST00000534173 291 ntBASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 RASSF8-AS1-204ENST00000535436 1121 ntTSL 4 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 NUPL2-212ENST00000548367 249 ntTSL 5 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 AL591767.2-201ENST00000554984 173 ntBASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 AC084759.2-202ENST00000557976 1053 ntTSL 5 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 AC010809.2-201ENST00000560404 964 ntTSL 5 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 AC127029.1-201ENST00000560822 237 ntBASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 MIR3187-201ENST00000583431 70 ntBASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 AC015878.2-201ENST00000584331 361 ntTSL 5 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 CARSP1-201ENST00000603171 889 ntBASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 Metazoa_SRP.44-201ENST00000615037 294 ntBASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 AC119619.1-201ENST00000619728 112 ntBASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 AC073107.2-201ENST00000620476 238 ntBASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 AL354732.1-201ENST00000416416 2080 ntTSL 5 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 DDIAS-211ENST00000533655 3533 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 MALAT1-201ENST00000508832 1519 ntTSL 2 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 SIPA1L1-211ENST00000555818 7831 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 SMARCA2-202ENST00000324954 1781 ntTSL 5 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 NOLC1-202ENST00000405356 3967 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 ARMC8-215ENST00000471453 2910 ntTSL 2 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 MIPOL1-211ENST00000556451 2282 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 NUSAP1-212ENST00000560747 2256 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 AC115619.1-201ENST00000567376 1605 ntBASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 PLP1-223ENST00000621218 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 SIDT2-219ENST00000620360 3924 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 PPFIA2-204ENST00000541017 4192 ntTSL 2 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 CD36-209ENST00000435819 2365 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 PHF7-202ENST00000347025 1472 ntTSL 5 BASIC7.81□□□□□ -1.16
NPIPA3F8WFD2 AL590491.1-201ENST00000611916 1988 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 CAGE1-202ENST00000338150 2771 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 RUBCNL-202ENST00000378784 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 RPL7A-201ENST00000315731 680 ntTSL 2 BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 FAM209A-201ENST00000371328 911 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 APLF-202ENST00000394342 1182 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 LINC00426-204ENST00000420219 1056 ntTSL 5 BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 KRT18P53-201ENST00000431919 117 ntBASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 Z97634.1-203ENST00000435229 471 ntBASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 CFL1P8-201ENST00000436148 475 ntBASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 AC239367.1-201ENST00000439389 936 ntBASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 SFTPA3P-201ENST00000446429 367 ntBASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 NBPF2P-201ENST00000453025 661 ntBASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 GAPDHP28-201ENST00000455134 1003 ntBASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 LINC02016-201ENST00000488425 927 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 AC044787.1-201ENST00000497325 792 ntBASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 HSPD1P18-201ENST00000504252 244 ntBASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 CCNC-215ENST00000523799 1035 ntTSL 3 BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 TEX51-207ENST00000568484 731 ntAPPRIS P2 TSL 3 BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 FRG2HP-201ENST00000568807 832 ntBASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 AC015909.4-201ENST00000577175 578 ntTSL 4 BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 RN7SL123P-201ENST00000577239 292 ntBASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 RN7SL203P-201ENST00000579600 296 ntBASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 TEX26-AS1-215ENST00000591300 815 ntTSL 5 BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 RN7SL796P-201ENST00000613991 291 ntBASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 AL592227.1-201ENST00000614748 126 ntBASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 PDZK1P1-203ENST00000616036 577 ntTSL 4 BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 AC040978.1-201ENST00000617244 1282 ntBASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 FP236315.1-201ENST00000623723 457 ntTSL 2 BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 OR5AR1-201ENST00000624596 1026 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 KCNH5-204ENST00000420622 2711 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 DCLRE1B-201ENST00000369563 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 MFAP5-203ENST00000433590 2308 ntTSL 2 BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 CAST-213ENST00000504465 2336 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
NPIPA3F8WFD2 LDHA-218ENST00000540430 2305 ntTSL 2 BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms