Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL662791.5-201ENST00000623334 466 ntTSL 3 BASIC7.91□□□□□ -1.14
NPIPA3F8WFD2 snoMe28S-Am2634.2-201ENST00000637869 80 ntBASIC7.91□□□□□ -1.14
NPIPA3F8WFD2 OR7A2P-202ENST00000641312 1219 ntBASIC7.91□□□□□ -1.14
NPIPA3F8WFD2 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NPIPA3F8WFD2 EIF4BP6-201ENST00000431936 1828 ntBASIC7.91□□□□□ -1.14
NPIPA3F8WFD2 ZIM2-207ENST00000601070 1965 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NPIPA3F8WFD2 AC116456.2-201ENST00000623018 2209 ntBASIC7.91□□□□□ -1.14
NPIPA3F8WFD2 KATNAL2-201ENST00000245121 2833 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
NPIPA3F8WFD2 THADA-202ENST00000402360 2974 ntTSL 5 BASIC7.91□□□□□ -1.14
NPIPA3F8WFD2 AL033381.1-201ENST00000314040 3435 ntTSL 2 BASIC7.91□□□□□ -1.14
NPIPA3F8WFD2 ELF4-204ENST00000615377 3878 ntTSL 5 BASIC7.91□□□□□ -1.14
NPIPA3F8WFD2 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC7.91□□□□□ -1.14
NPIPA3F8WFD2 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NPIPA3F8WFD2 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NPIPA3F8WFD2 FAM126A-202ENST00000409923 3130 ntTSL 5 BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 ADAM21P1-201ENST00000529267 2170 ntBASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 MAPK10-232ENST00000515400 2076 ntTSL 5 BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 GBP5-201ENST00000370459 2011 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 AL662907.3-201ENST00000641271 1932 ntBASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 OR14I1-201ENST00000342623 936 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 IGLV2-14-201ENST00000390312 402 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 RN7SKP152-201ENST00000410444 315 ntBASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 RNA5SP209-201ENST00000411237 97 ntBASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 RPL7L1P12-201ENST00000417594 729 ntBASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 AC239727.1-201ENST00000431432 623 ntTSL 3 BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 DAB1-AS1-203ENST00000432897 656 ntTSL 5 BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 RPL12P15-201ENST00000433385 499 ntBASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 ALG13-204ENST00000436609 3812 ntTSL 5 BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 RN7SL263P-201ENST00000467969 290 ntBASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 C2orf74-205ENST00000488469 1070 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 AC106868.1-201ENST00000505272 992 ntBASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 ANAPC10-209ENST00000507656 1025 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 LINC01944-201ENST00000517916 416 ntTSL 3 BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 AC021546.1-201ENST00000518927 1031 ntTSL 3 BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 IGLC5-201ENST00000519670 293 ntBASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 HTATIP2-206ENST00000531058 1060 ntTSL 3 BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 AL117190.2-201ENST00000554041 289 ntTSL 2 BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 AC005479.1-201ENST00000554629 451 ntBASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 AA06-201ENST00000579745 632 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 ZSCAN30-210ENST00000601405 510 ntTSL 5 BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 STX8P1-201ENST00000603161 355 ntBASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 AC090950.1-201ENST00000604625 830 ntBASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 AC073218.2-201ENST00000606468 295 ntTSL 5 BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 LINC02028-221ENST00000622169 621 ntTSL 5 BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 ZNF512-202ENST00000379717 3417 ntAPPRIS ALT1 TSL 5 BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 DPH3-204ENST00000488423 3131 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC7.9□□□□□ -1.14
NPIPA3F8WFD2 SCMH1-203ENST00000361191 2906 ntTSL 5 BASIC7.9□□□□□ -1.15
NPIPA3F8WFD2 ENTPD1-AS1-211ENST00000454638 2933 ntTSL 2 BASIC7.9□□□□□ -1.15
NPIPA3F8WFD2 MIER1-201ENST00000355356 4818 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
NPIPA3F8WFD2 LINC00939-202ENST00000507313 2819 ntTSL 2 BASIC7.9□□□□□ -1.15
NPIPA3F8WFD2 NECAP1-201ENST00000339754 2593 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.15
NPIPA3F8WFD2 MAPK10-240ENST00000639175 2596 ntAPPRIS P2 TSL 5 BASIC7.9□□□□□ -1.15
NPIPA3F8WFD2 AC037487.1-201ENST00000583416 2474 ntTSL 5 BASIC7.9□□□□□ -1.15
NPIPA3F8WFD2 SKAP2-201ENST00000345317 3998 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
NPIPA3F8WFD2 IRF2-201ENST00000393593 2303 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
NPIPA3F8WFD2 HHAT-204ENST00000413764 3575 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
NPIPA3F8WFD2 RBM18-201ENST00000417201 4974 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
NPIPA3F8WFD2 ZBTB14-207ENST00000614697 3341 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
NPIPA3F8WFD2 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
NPIPA3F8WFD2 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 XIST-211ENST00000635841 1734 ntTSL 5 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 LINC01808-203ENST00000641932 1643 ntBASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 DNAJC5G-204ENST00000406962 1562 ntTSL 5 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 AC107959.2-201ENST00000501897 2636 ntTSL 2 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 ZNF35-201ENST00000296092 2503 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 TMEM68-201ENST00000334667 2401 ntTSL 2 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 RPGRIP1L-210ENST00000568653 2429 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 AC104619.3-201ENST00000509116 1387 ntBASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 CRYGS-202ENST00000392499 1132 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 AC005999.1-201ENST00000414409 588 ntTSL 4 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 ISX-AS1-201ENST00000427881 202 ntTSL 3 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 AL772284.1-201ENST00000443421 905 ntBASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 RFC3P1-201ENST00000454568 682 ntBASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 RN7SL239P-201ENST00000490061 300 ntBASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 PDPN-209ENST00000510906 786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 RPS20-204ENST00000519606 424 ntTSL 3 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 AL133163.2-201ENST00000555024 624 ntTSL 3 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 LINC02296-201ENST00000557070 544 ntTSL 4 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 AC020687.1-201ENST00000560439 448 ntTSL 3 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 AC009154.1-201ENST00000565822 508 ntTSL 3 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 LINC01834-201ENST00000567374 385 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 OR4C45-201ENST00000568934 921 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
NPIPA3F8WFD2 AC011447.3-205ENST00000592022 1268 ntTSL 3 BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms