Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
CLIC4Q9Y696 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLIC4Q9Y696 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.26■■□□□ 1.31
CLIC4Q9Y696 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.26■■□□□ 1.31
CLIC4Q9Y696 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLIC4Q9Y696 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLIC4Q9Y696 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CLIC4Q9Y696 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.26■■□□□ 1.31
CLIC4Q9Y696 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
CLIC4Q9Y696 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.26■■□□□ 1.31
CLIC4Q9Y696 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.26■■□□□ 1.31
CLIC4Q9Y696 AC010536.3-201ENST00000620306 533 ntBASIC23.26■■□□□ 1.31
CLIC4Q9Y696 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
CLIC4Q9Y696 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLIC4Q9Y696 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
CLIC4Q9Y696 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLIC4Q9Y696 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
CLIC4Q9Y696 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.25■■□□□ 1.31
CLIC4Q9Y696 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLIC4Q9Y696 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CLIC4Q9Y696 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLIC4Q9Y696 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLIC4Q9Y696 KRT18P5-201ENST00000436075 1291 ntBASIC23.25■■□□□ 1.31
CLIC4Q9Y696 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.25■■□□□ 1.31
CLIC4Q9Y696 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.25■■□□□ 1.31
CLIC4Q9Y696 TERF1P5-201ENST00000477545 1207 ntBASIC23.25■■□□□ 1.31
CLIC4Q9Y696 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CLIC4Q9Y696 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.25■■□□□ 1.31
CLIC4Q9Y696 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.25■■□□□ 1.31
CLIC4Q9Y696 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
CLIC4Q9Y696 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.25■■□□□ 1.31
CLIC4Q9Y696 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23.25■■□□□ 1.31
CLIC4Q9Y696 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CLIC4Q9Y696 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
CLIC4Q9Y696 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CLIC4Q9Y696 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLIC4Q9Y696 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.24■■□□□ 1.31
CLIC4Q9Y696 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CLIC4Q9Y696 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLIC4Q9Y696 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLIC4Q9Y696 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLIC4Q9Y696 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLIC4Q9Y696 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLIC4Q9Y696 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.24■■□□□ 1.31
CLIC4Q9Y696 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CLIC4Q9Y696 AC026271.2-201ENST00000428091 497 ntBASIC23.24■■□□□ 1.31
CLIC4Q9Y696 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
CLIC4Q9Y696 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CLIC4Q9Y696 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CLIC4Q9Y696 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.24■■□□□ 1.31
CLIC4Q9Y696 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
CLIC4Q9Y696 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CLIC4Q9Y696 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.23■■□□□ 1.31
CLIC4Q9Y696 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CLIC4Q9Y696 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.23■■□□□ 1.31
CLIC4Q9Y696 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CLIC4Q9Y696 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLIC4Q9Y696 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLIC4Q9Y696 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
CLIC4Q9Y696 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.23■■□□□ 1.31
CLIC4Q9Y696 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.23■■□□□ 1.31
CLIC4Q9Y696 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC23.23■■□□□ 1.31
CLIC4Q9Y696 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.23■■□□□ 1.31
CLIC4Q9Y696 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLIC4Q9Y696 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.22■■□□□ 1.31
CLIC4Q9Y696 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLIC4Q9Y696 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
CLIC4Q9Y696 TCF3P1-201ENST00000423021 1937 ntBASIC23.22■■□□□ 1.31
CLIC4Q9Y696 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLIC4Q9Y696 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.22■■□□□ 1.31
CLIC4Q9Y696 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CLIC4Q9Y696 CDV3P1-201ENST00000471403 739 ntBASIC23.22■■□□□ 1.31
CLIC4Q9Y696 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CLIC4Q9Y696 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLIC4Q9Y696 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLIC4Q9Y696 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC23.21■■□□□ 1.31
CLIC4Q9Y696 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CLIC4Q9Y696 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC23.21■■□□□ 1.31
CLIC4Q9Y696 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
CLIC4Q9Y696 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLIC4Q9Y696 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.21■■□□□ 1.31
CLIC4Q9Y696 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CLIC4Q9Y696 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CLIC4Q9Y696 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.21■■□□□ 1.31
CLIC4Q9Y696 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.21■■□□□ 1.31
CLIC4Q9Y696 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC23.21■■□□□ 1.31
CLIC4Q9Y696 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLIC4Q9Y696 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.21■■□□□ 1.31
CLIC4Q9Y696 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLIC4Q9Y696 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CLIC4Q9Y696 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
CLIC4Q9Y696 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.21■■□□□ 1.31
CLIC4Q9Y696 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
CLIC4Q9Y696 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.31
CLIC4Q9Y696 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLIC4Q9Y696 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CLIC4Q9Y696 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLIC4Q9Y696 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CLIC4Q9Y696 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLIC4Q9Y696 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms