Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GPC6Q9Y625 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
GPC6Q9Y625 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
GPC6Q9Y625 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPC6Q9Y625 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
GPC6Q9Y625 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
GPC6Q9Y625 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
GPC6Q9Y625 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
GPC6Q9Y625 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPC6Q9Y625 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPC6Q9Y625 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
GPC6Q9Y625 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GPC6Q9Y625 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.18■□□□□ 0.66
GPC6Q9Y625 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GPC6Q9Y625 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.18■□□□□ 0.66
GPC6Q9Y625 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.18■□□□□ 0.66
GPC6Q9Y625 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.18■□□□□ 0.66
GPC6Q9Y625 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPC6Q9Y625 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
GPC6Q9Y625 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
GPC6Q9Y625 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
GPC6Q9Y625 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPC6Q9Y625 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPC6Q9Y625 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.18■□□□□ 0.66
GPC6Q9Y625 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPC6Q9Y625 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.17■□□□□ 0.66
GPC6Q9Y625 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.17■□□□□ 0.66
GPC6Q9Y625 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC6Q9Y625 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC6Q9Y625 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GPC6Q9Y625 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC6Q9Y625 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC6Q9Y625 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
GPC6Q9Y625 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC6Q9Y625 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.17■□□□□ 0.66
GPC6Q9Y625 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.17■□□□□ 0.66
GPC6Q9Y625 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC6Q9Y625 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC6Q9Y625 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GPC6Q9Y625 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.17■□□□□ 0.66
GPC6Q9Y625 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GPC6Q9Y625 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GPC6Q9Y625 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GPC6Q9Y625 AC020907.5-201ENST00000624372 1936 ntBASIC19.17■□□□□ 0.66
GPC6Q9Y625 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC6Q9Y625 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC6Q9Y625 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC6Q9Y625 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPC6Q9Y625 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
GPC6Q9Y625 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
GPC6Q9Y625 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPC6Q9Y625 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.16■□□□□ 0.66
GPC6Q9Y625 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GPC6Q9Y625 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPC6Q9Y625 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
GPC6Q9Y625 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
GPC6Q9Y625 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GPC6Q9Y625 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GPC6Q9Y625 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.16■□□□□ 0.66
GPC6Q9Y625 AC138907.5-202ENST00000569484 235 ntBASIC19.16■□□□□ 0.66
GPC6Q9Y625 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.16■□□□□ 0.66
GPC6Q9Y625 MIR5787-201ENST00000611784 55 ntBASIC19.16■□□□□ 0.66
GPC6Q9Y625 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.16■□□□□ 0.66
GPC6Q9Y625 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
GPC6Q9Y625 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GPC6Q9Y625 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPC6Q9Y625 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPC6Q9Y625 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.16■□□□□ 0.66
GPC6Q9Y625 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.16■□□□□ 0.66
GPC6Q9Y625 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPC6Q9Y625 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPC6Q9Y625 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GPC6Q9Y625 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.15■□□□□ 0.66
GPC6Q9Y625 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.15■□□□□ 0.66
GPC6Q9Y625 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GPC6Q9Y625 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
GPC6Q9Y625 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.15■□□□□ 0.66
GPC6Q9Y625 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GPC6Q9Y625 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GPC6Q9Y625 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
GPC6Q9Y625 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.15■□□□□ 0.66
GPC6Q9Y625 MIR935-201ENST00000401179 91 ntBASIC19.15■□□□□ 0.66
GPC6Q9Y625 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.15■□□□□ 0.66
GPC6Q9Y625 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.15■□□□□ 0.66
GPC6Q9Y625 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
GPC6Q9Y625 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.15■□□□□ 0.66
GPC6Q9Y625 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GPC6Q9Y625 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GPC6Q9Y625 FP700111.2-201ENST00000619190 1892 ntBASIC19.15■□□□□ 0.66
GPC6Q9Y625 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GPC6Q9Y625 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GPC6Q9Y625 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.15■□□□□ 0.66
GPC6Q9Y625 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
GPC6Q9Y625 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GPC6Q9Y625 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
GPC6Q9Y625 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
GPC6Q9Y625 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC6Q9Y625 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC6Q9Y625 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC6Q9Y625 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms