Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC22.53■■□□□ 1.2
SCN10AQ9Y5Y9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SCN10AQ9Y5Y9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.52■■□□□ 1.2
SCN10AQ9Y5Y9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SCN10AQ9Y5Y9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
SCN10AQ9Y5Y9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.52■■□□□ 1.2
SCN10AQ9Y5Y9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.52■■□□□ 1.2
SCN10AQ9Y5Y9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.52■■□□□ 1.2
SCN10AQ9Y5Y9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SCN10AQ9Y5Y9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.52■■□□□ 1.2
SCN10AQ9Y5Y9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
SCN10AQ9Y5Y9 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SCN10AQ9Y5Y9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.52■■□□□ 1.2
SCN10AQ9Y5Y9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SCN10AQ9Y5Y9 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.52■■□□□ 1.2
SCN10AQ9Y5Y9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC22.52■■□□□ 1.2
SCN10AQ9Y5Y9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.19
SCN10AQ9Y5Y9 ECEL1P1-201ENST00000373592 1742 ntBASIC22.51■■□□□ 1.19
SCN10AQ9Y5Y9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SCN10AQ9Y5Y9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SCN10AQ9Y5Y9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC22.51■■□□□ 1.19
SCN10AQ9Y5Y9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC22.51■■□□□ 1.19
SCN10AQ9Y5Y9 TSPY15P-201ENST00000457163 923 ntBASIC22.51■■□□□ 1.19
SCN10AQ9Y5Y9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SCN10AQ9Y5Y9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
SCN10AQ9Y5Y9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.51■■□□□ 1.19
SCN10AQ9Y5Y9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
SCN10AQ9Y5Y9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SCN10AQ9Y5Y9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SCN10AQ9Y5Y9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
SCN10AQ9Y5Y9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SCN10AQ9Y5Y9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SCN10AQ9Y5Y9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SCN10AQ9Y5Y9 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SCN10AQ9Y5Y9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SCN10AQ9Y5Y9 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.5■■□□□ 1.19
SCN10AQ9Y5Y9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SCN10AQ9Y5Y9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC22.5■■□□□ 1.19
SCN10AQ9Y5Y9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.5■■□□□ 1.19
SCN10AQ9Y5Y9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC22.5■■□□□ 1.19
SCN10AQ9Y5Y9 AL121829.2-201ENST00000620908 328 ntBASIC22.5■■□□□ 1.19
SCN10AQ9Y5Y9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
SCN10AQ9Y5Y9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
SCN10AQ9Y5Y9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.5■■□□□ 1.19
SCN10AQ9Y5Y9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
SCN10AQ9Y5Y9 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC22.5■■□□□ 1.19
SCN10AQ9Y5Y9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.5■■□□□ 1.19
SCN10AQ9Y5Y9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.5■■□□□ 1.19
SCN10AQ9Y5Y9 PRKY-204ENST00000533551 1019 ntBASIC22.5■■□□□ 1.19
SCN10AQ9Y5Y9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SCN10AQ9Y5Y9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SCN10AQ9Y5Y9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SCN10AQ9Y5Y9 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
SCN10AQ9Y5Y9 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SCN10AQ9Y5Y9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.49■■□□□ 1.19
SCN10AQ9Y5Y9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC22.49■■□□□ 1.19
SCN10AQ9Y5Y9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC22.49■■□□□ 1.19
SCN10AQ9Y5Y9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SCN10AQ9Y5Y9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SCN10AQ9Y5Y9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SCN10AQ9Y5Y9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SCN10AQ9Y5Y9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.49■■□□□ 1.19
SCN10AQ9Y5Y9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC22.49■■□□□ 1.19
SCN10AQ9Y5Y9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC22.49■■□□□ 1.19
SCN10AQ9Y5Y9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
SCN10AQ9Y5Y9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.49■■□□□ 1.19
SCN10AQ9Y5Y9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SCN10AQ9Y5Y9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SCN10AQ9Y5Y9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SCN10AQ9Y5Y9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.48■■□□□ 1.19
SCN10AQ9Y5Y9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SCN10AQ9Y5Y9 MIR1224-201ENST00000408193 85 ntBASIC22.48■■□□□ 1.19
SCN10AQ9Y5Y9 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.48■■□□□ 1.19
SCN10AQ9Y5Y9 AC124283.5-201ENST00000624661 1809 ntBASIC22.48■■□□□ 1.19
SCN10AQ9Y5Y9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SCN10AQ9Y5Y9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SCN10AQ9Y5Y9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.48■■□□□ 1.19
SCN10AQ9Y5Y9 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SCN10AQ9Y5Y9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SCN10AQ9Y5Y9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SCN10AQ9Y5Y9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SCN10AQ9Y5Y9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SCN10AQ9Y5Y9 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SCN10AQ9Y5Y9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SCN10AQ9Y5Y9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
SCN10AQ9Y5Y9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SCN10AQ9Y5Y9 AL121906.2-201ENST00000621597 723 ntBASIC22.47■■□□□ 1.19
SCN10AQ9Y5Y9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC22.47■■□□□ 1.19
SCN10AQ9Y5Y9 AC097493.4-201ENST00000641197 219 ntBASIC22.47■■□□□ 1.19
SCN10AQ9Y5Y9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SCN10AQ9Y5Y9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SCN10AQ9Y5Y9 AC011484.1-201ENST00000377652 1995 ntBASIC22.47■■□□□ 1.19
SCN10AQ9Y5Y9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.47■■□□□ 1.19
SCN10AQ9Y5Y9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
SCN10AQ9Y5Y9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.47■■□□□ 1.19
SCN10AQ9Y5Y9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
SCN10AQ9Y5Y9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SCN10AQ9Y5Y9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.47■■□□□ 1.19
SCN10AQ9Y5Y9 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
SCN10AQ9Y5Y9 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms