Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.75■□□□□ 0.75
PCDHGA3Q9Y5H0 AC060766.5-201ENST00000590539 871 ntBASIC19.75■□□□□ 0.75
PCDHGA3Q9Y5H0 HLA-B-256ENST00000639848 1089 ntBASIC19.75■□□□□ 0.75
PCDHGA3Q9Y5H0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA3Q9Y5H0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA3Q9Y5H0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PCDHGA3Q9Y5H0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA3Q9Y5H0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA3Q9Y5H0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.75■□□□□ 0.75
PCDHGA3Q9Y5H0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.75■□□□□ 0.75
PCDHGA3Q9Y5H0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHGA3Q9Y5H0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA3Q9Y5H0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.74■□□□□ 0.75
PCDHGA3Q9Y5H0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PCDHGA3Q9Y5H0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.74■□□□□ 0.75
PCDHGA3Q9Y5H0 MCRIP2P1-201ENST00000394346 511 ntBASIC19.74■□□□□ 0.75
PCDHGA3Q9Y5H0 AL158047.1-201ENST00000445918 881 ntBASIC19.74■□□□□ 0.75
PCDHGA3Q9Y5H0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
PCDHGA3Q9Y5H0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA3Q9Y5H0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHGA3Q9Y5H0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHGA3Q9Y5H0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA3Q9Y5H0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA3Q9Y5H0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA3Q9Y5H0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA3Q9Y5H0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA3Q9Y5H0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA3Q9Y5H0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA3Q9Y5H0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA3Q9Y5H0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHGA3Q9Y5H0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA3Q9Y5H0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.73■□□□□ 0.75
PCDHGA3Q9Y5H0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGA3Q9Y5H0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA3Q9Y5H0 AC073648.6-201ENST00000641589 218 ntBASIC19.73■□□□□ 0.75
PCDHGA3Q9Y5H0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGA3Q9Y5H0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA3Q9Y5H0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGA3Q9Y5H0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGA3Q9Y5H0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGA3Q9Y5H0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHGA3Q9Y5H0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PCDHGA3Q9Y5H0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA3Q9Y5H0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHGA3Q9Y5H0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
PCDHGA3Q9Y5H0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA3Q9Y5H0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA3Q9Y5H0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA3Q9Y5H0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.72■□□□□ 0.75
PCDHGA3Q9Y5H0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PCDHGA3Q9Y5H0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGA3Q9Y5H0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PCDHGA3Q9Y5H0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGA3Q9Y5H0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA3Q9Y5H0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGA3Q9Y5H0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGA3Q9Y5H0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
PCDHGA3Q9Y5H0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA3Q9Y5H0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHGA3Q9Y5H0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PCDHGA3Q9Y5H0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PCDHGA3Q9Y5H0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDHGA3Q9Y5H0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA3Q9Y5H0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA3Q9Y5H0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA3Q9Y5H0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA3Q9Y5H0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.71■□□□□ 0.75
PCDHGA3Q9Y5H0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA3Q9Y5H0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.71■□□□□ 0.75
PCDHGA3Q9Y5H0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA3Q9Y5H0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA3Q9Y5H0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGA3Q9Y5H0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA3Q9Y5H0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA3Q9Y5H0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA3Q9Y5H0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA3Q9Y5H0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA3Q9Y5H0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDHGA3Q9Y5H0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA3Q9Y5H0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA3Q9Y5H0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA3Q9Y5H0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGA3Q9Y5H0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
PCDHGA3Q9Y5H0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA3Q9Y5H0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA3Q9Y5H0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA3Q9Y5H0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGA3Q9Y5H0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGA3Q9Y5H0 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms