Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PKP3Q9Y446 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PKP3Q9Y446 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
PKP3Q9Y446 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PKP3Q9Y446 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.42■□□□□ 0.86
PKP3Q9Y446 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PKP3Q9Y446 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.42■□□□□ 0.86
PKP3Q9Y446 AL512625.2-201ENST00000417533 625 ntBASIC20.42■□□□□ 0.86
PKP3Q9Y446 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.42■□□□□ 0.86
PKP3Q9Y446 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PKP3Q9Y446 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.42■□□□□ 0.86
PKP3Q9Y446 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.42■□□□□ 0.86
PKP3Q9Y446 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.42■□□□□ 0.86
PKP3Q9Y446 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.42■□□□□ 0.86
PKP3Q9Y446 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
PKP3Q9Y446 AC087633.2-202ENST00000565166 1439 ntBASIC20.42■□□□□ 0.86
PKP3Q9Y446 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PKP3Q9Y446 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PKP3Q9Y446 AF201337.1-201ENST00000520239 748 ntBASIC20.41■□□□□ 0.86
PKP3Q9Y446 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.41■□□□□ 0.86
PKP3Q9Y446 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PKP3Q9Y446 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.41■□□□□ 0.86
PKP3Q9Y446 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.41■□□□□ 0.86
PKP3Q9Y446 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PKP3Q9Y446 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PKP3Q9Y446 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PKP3Q9Y446 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PKP3Q9Y446 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PKP3Q9Y446 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.4■□□□□ 0.86
PKP3Q9Y446 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PKP3Q9Y446 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PKP3Q9Y446 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PKP3Q9Y446 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.4■□□□□ 0.86
PKP3Q9Y446 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.4■□□□□ 0.86
PKP3Q9Y446 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PKP3Q9Y446 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PKP3Q9Y446 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PKP3Q9Y446 AC105036.2-201ENST00000569468 176 ntBASIC20.4■□□□□ 0.86
PKP3Q9Y446 AC010980.2-201ENST00000587099 1412 ntBASIC20.4■□□□□ 0.86
PKP3Q9Y446 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.4■□□□□ 0.86
PKP3Q9Y446 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.4■□□□□ 0.86
PKP3Q9Y446 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
PKP3Q9Y446 AL050303.2-201ENST00000619798 666 ntBASIC20.4■□□□□ 0.86
PKP3Q9Y446 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.4■□□□□ 0.86
PKP3Q9Y446 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.4■□□□□ 0.86
PKP3Q9Y446 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PKP3Q9Y446 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.4■□□□□ 0.86
PKP3Q9Y446 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PKP3Q9Y446 AL121603.2-201ENST00000557373 2117 ntBASIC20.39■□□□□ 0.86
PKP3Q9Y446 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PKP3Q9Y446 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
PKP3Q9Y446 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PKP3Q9Y446 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.39■□□□□ 0.85
PKP3Q9Y446 AL356652.1-201ENST00000615962 565 ntBASIC20.39■□□□□ 0.85
PKP3Q9Y446 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PKP3Q9Y446 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PKP3Q9Y446 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PKP3Q9Y446 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PKP3Q9Y446 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PKP3Q9Y446 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PKP3Q9Y446 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.39■□□□□ 0.85
PKP3Q9Y446 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.39■□□□□ 0.85
PKP3Q9Y446 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.39■□□□□ 0.85
PKP3Q9Y446 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
PKP3Q9Y446 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.38■□□□□ 0.85
PKP3Q9Y446 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PKP3Q9Y446 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PKP3Q9Y446 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PKP3Q9Y446 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.38■□□□□ 0.85
PKP3Q9Y446 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PKP3Q9Y446 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PKP3Q9Y446 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PKP3Q9Y446 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PKP3Q9Y446 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.38■□□□□ 0.85
PKP3Q9Y446 AC093787.1-201ENST00000450396 207 ntBASIC20.38■□□□□ 0.85
PKP3Q9Y446 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.38■□□□□ 0.85
PKP3Q9Y446 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.38■□□□□ 0.85
PKP3Q9Y446 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.38■□□□□ 0.85
PKP3Q9Y446 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
PKP3Q9Y446 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PKP3Q9Y446 AL121832.2-201ENST00000610979 668 ntBASIC20.38■□□□□ 0.85
PKP3Q9Y446 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PKP3Q9Y446 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PKP3Q9Y446 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PKP3Q9Y446 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PKP3Q9Y446 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PKP3Q9Y446 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.37■□□□□ 0.85
PKP3Q9Y446 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PKP3Q9Y446 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PKP3Q9Y446 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PKP3Q9Y446 KRT8P36-201ENST00000489121 1440 ntBASIC20.37■□□□□ 0.85
PKP3Q9Y446 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PKP3Q9Y446 SLC25A24-204ENST00000569674 2357 ntBASIC20.37■□□□□ 0.85
PKP3Q9Y446 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PKP3Q9Y446 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
PKP3Q9Y446 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PKP3Q9Y446 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.37■□□□□ 0.85
PKP3Q9Y446 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PKP3Q9Y446 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PKP3Q9Y446 KRT18P68-201ENST00000392293 1000 ntBASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms