Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SSX2IPQ9Y2D8 RPPH1-201ENST00000516869 333 ntBASIC21.89■■□□□ 1.09
SSX2IPQ9Y2D8 C1QBPP2-201ENST00000528754 825 ntBASIC21.89■■□□□ 1.09
SSX2IPQ9Y2D8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.89■■□□□ 1.09
SSX2IPQ9Y2D8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SSX2IPQ9Y2D8 SOX15-203ENST00000570788 1093 ntBASIC21.89■■□□□ 1.09
SSX2IPQ9Y2D8 RN7SL471P-201ENST00000580476 299 ntBASIC21.89■■□□□ 1.09
SSX2IPQ9Y2D8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.89■■□□□ 1.09
SSX2IPQ9Y2D8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SSX2IPQ9Y2D8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SSX2IPQ9Y2D8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.89■■□□□ 1.09
SSX2IPQ9Y2D8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.89■■□□□ 1.09
SSX2IPQ9Y2D8 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
SSX2IPQ9Y2D8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SSX2IPQ9Y2D8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SSX2IPQ9Y2D8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SSX2IPQ9Y2D8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SSX2IPQ9Y2D8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.88■■□□□ 1.09
SSX2IPQ9Y2D8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SSX2IPQ9Y2D8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.88■■□□□ 1.09
SSX2IPQ9Y2D8 AL596275.1-201ENST00000423464 877 ntBASIC21.88■■□□□ 1.09
SSX2IPQ9Y2D8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.88■■□□□ 1.09
SSX2IPQ9Y2D8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.88■■□□□ 1.09
SSX2IPQ9Y2D8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.88■■□□□ 1.09
SSX2IPQ9Y2D8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
SSX2IPQ9Y2D8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SSX2IPQ9Y2D8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.88■■□□□ 1.09
SSX2IPQ9Y2D8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SSX2IPQ9Y2D8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SSX2IPQ9Y2D8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.87■■□□□ 1.09
SSX2IPQ9Y2D8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.87■■□□□ 1.09
SSX2IPQ9Y2D8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.87■■□□□ 1.09
SSX2IPQ9Y2D8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SSX2IPQ9Y2D8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.87■■□□□ 1.09
SSX2IPQ9Y2D8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SSX2IPQ9Y2D8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SSX2IPQ9Y2D8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.87■■□□□ 1.09
SSX2IPQ9Y2D8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SSX2IPQ9Y2D8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.87■■□□□ 1.09
SSX2IPQ9Y2D8 C2orf69P4-201ENST00000565394 541 ntBASIC21.87■■□□□ 1.09
SSX2IPQ9Y2D8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.87■■□□□ 1.09
SSX2IPQ9Y2D8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.87■■□□□ 1.09
SSX2IPQ9Y2D8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.87■■□□□ 1.09
SSX2IPQ9Y2D8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SSX2IPQ9Y2D8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SSX2IPQ9Y2D8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SSX2IPQ9Y2D8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SSX2IPQ9Y2D8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
SSX2IPQ9Y2D8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
SSX2IPQ9Y2D8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SSX2IPQ9Y2D8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.87■■□□□ 1.09
SSX2IPQ9Y2D8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SSX2IPQ9Y2D8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.86■■□□□ 1.09
SSX2IPQ9Y2D8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SSX2IPQ9Y2D8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SSX2IPQ9Y2D8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SSX2IPQ9Y2D8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SSX2IPQ9Y2D8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SSX2IPQ9Y2D8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SSX2IPQ9Y2D8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
SSX2IPQ9Y2D8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SSX2IPQ9Y2D8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SSX2IPQ9Y2D8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
SSX2IPQ9Y2D8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SSX2IPQ9Y2D8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
SSX2IPQ9Y2D8 AC087633.2-202ENST00000565166 1439 ntBASIC21.86■■□□□ 1.09
SSX2IPQ9Y2D8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SSX2IPQ9Y2D8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SSX2IPQ9Y2D8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.85■■□□□ 1.09
SSX2IPQ9Y2D8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
SSX2IPQ9Y2D8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SSX2IPQ9Y2D8 AC242852.2-201ENST00000615738 1807 ntBASIC21.85■■□□□ 1.09
SSX2IPQ9Y2D8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SSX2IPQ9Y2D8 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SSX2IPQ9Y2D8 POM121L13P-201ENST00000422362 380 ntBASIC21.85■■□□□ 1.09
SSX2IPQ9Y2D8 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.85■■□□□ 1.09
SSX2IPQ9Y2D8 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.85■■□□□ 1.09
SSX2IPQ9Y2D8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.85■■□□□ 1.09
SSX2IPQ9Y2D8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SSX2IPQ9Y2D8 AC007375.3-201ENST00000600936 2314 ntBASIC21.85■■□□□ 1.09
SSX2IPQ9Y2D8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SSX2IPQ9Y2D8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SSX2IPQ9Y2D8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SSX2IPQ9Y2D8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SSX2IPQ9Y2D8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SSX2IPQ9Y2D8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
SSX2IPQ9Y2D8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.84■■□□□ 1.09
SSX2IPQ9Y2D8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
SSX2IPQ9Y2D8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.84■■□□□ 1.09
SSX2IPQ9Y2D8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SSX2IPQ9Y2D8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SSX2IPQ9Y2D8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SSX2IPQ9Y2D8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SSX2IPQ9Y2D8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SSX2IPQ9Y2D8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
SSX2IPQ9Y2D8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SSX2IPQ9Y2D8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SSX2IPQ9Y2D8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SSX2IPQ9Y2D8 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SSX2IPQ9Y2D8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms