Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
DDX41Q9UJV9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX41Q9UJV9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
DDX41Q9UJV9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.38■■□□□ 1.33
DDX41Q9UJV9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX41Q9UJV9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX41Q9UJV9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.37■■□□□ 1.33
DDX41Q9UJV9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX41Q9UJV9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
DDX41Q9UJV9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.37■■□□□ 1.33
DDX41Q9UJV9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
DDX41Q9UJV9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC23.37■■□□□ 1.33
DDX41Q9UJV9 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX41Q9UJV9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX41Q9UJV9 AC007322.3-201ENST00000426526 701 ntBASIC23.37■■□□□ 1.33
DDX41Q9UJV9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.37■■□□□ 1.33
DDX41Q9UJV9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX41Q9UJV9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
DDX41Q9UJV9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
DDX41Q9UJV9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.37■■□□□ 1.33
DDX41Q9UJV9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
DDX41Q9UJV9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DDX41Q9UJV9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DDX41Q9UJV9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.36■■□□□ 1.33
DDX41Q9UJV9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
DDX41Q9UJV9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.36■■□□□ 1.33
DDX41Q9UJV9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.36■■□□□ 1.33
DDX41Q9UJV9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX41Q9UJV9 MCRIP2P1-201ENST00000394346 511 ntBASIC23.36■■□□□ 1.33
DDX41Q9UJV9 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.36■■□□□ 1.33
DDX41Q9UJV9 KRT18P29-201ENST00000397031 1267 ntBASIC23.36■■□□□ 1.33
DDX41Q9UJV9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.36■■□□□ 1.33
DDX41Q9UJV9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
DDX41Q9UJV9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
DDX41Q9UJV9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.36■■□□□ 1.33
DDX41Q9UJV9 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.36■■□□□ 1.33
DDX41Q9UJV9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
DDX41Q9UJV9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC23.36■■□□□ 1.33
DDX41Q9UJV9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
DDX41Q9UJV9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
DDX41Q9UJV9 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
DDX41Q9UJV9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC23.36■■□□□ 1.33
DDX41Q9UJV9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX41Q9UJV9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX41Q9UJV9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX41Q9UJV9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX41Q9UJV9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX41Q9UJV9 PRORSD1P-201ENST00000295112 541 ntBASIC23.35■■□□□ 1.33
DDX41Q9UJV9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.35■■□□□ 1.33
DDX41Q9UJV9 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
DDX41Q9UJV9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
DDX41Q9UJV9 ESRRAP1-201ENST00000400596 1257 ntBASIC23.35■■□□□ 1.33
DDX41Q9UJV9 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.35■■□□□ 1.33
DDX41Q9UJV9 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.35■■□□□ 1.33
DDX41Q9UJV9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC23.35■■□□□ 1.33
DDX41Q9UJV9 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23.35■■□□□ 1.33
DDX41Q9UJV9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX41Q9UJV9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX41Q9UJV9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
DDX41Q9UJV9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC23.35■■□□□ 1.33
DDX41Q9UJV9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
DDX41Q9UJV9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
DDX41Q9UJV9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
DDX41Q9UJV9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
DDX41Q9UJV9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX41Q9UJV9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX41Q9UJV9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX41Q9UJV9 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX41Q9UJV9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX41Q9UJV9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.34■■□□□ 1.33
DDX41Q9UJV9 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX41Q9UJV9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX41Q9UJV9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX41Q9UJV9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX41Q9UJV9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX41Q9UJV9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DDX41Q9UJV9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.33■■□□□ 1.33
DDX41Q9UJV9 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX41Q9UJV9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.33■■□□□ 1.33
DDX41Q9UJV9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX41Q9UJV9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
DDX41Q9UJV9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.33■■□□□ 1.33
DDX41Q9UJV9 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.33■■□□□ 1.33
DDX41Q9UJV9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC23.33■■□□□ 1.33
DDX41Q9UJV9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.33■■□□□ 1.33
DDX41Q9UJV9 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC23.33■■□□□ 1.33
DDX41Q9UJV9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
DDX41Q9UJV9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX41Q9UJV9 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
DDX41Q9UJV9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
DDX41Q9UJV9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC23.33■■□□□ 1.32
DDX41Q9UJV9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.33■■□□□ 1.32
DDX41Q9UJV9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
DDX41Q9UJV9 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
DDX41Q9UJV9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
DDX41Q9UJV9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX41Q9UJV9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DDX41Q9UJV9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
DDX41Q9UJV9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
DDX41Q9UJV9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms