Protein–RNA interactions for Protein: Q9UJK0

TSR3, Ribosome biogenesis protein TSR3 homolog, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3Q9UJK0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
TSR3Q9UJK0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSR3Q9UJK0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TSR3Q9UJK0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TSR3Q9UJK0 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TSR3Q9UJK0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSR3Q9UJK0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
TSR3Q9UJK0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TSR3Q9UJK0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.18■□□□□ 0.82
TSR3Q9UJK0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TSR3Q9UJK0 AC243732.1-201ENST00000612648 864 ntBASIC20.18■□□□□ 0.82
TSR3Q9UJK0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TSR3Q9UJK0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSR3Q9UJK0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSR3Q9UJK0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSR3Q9UJK0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TSR3Q9UJK0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSR3Q9UJK0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSR3Q9UJK0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TSR3Q9UJK0 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.18■□□□□ 0.82
TSR3Q9UJK0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TSR3Q9UJK0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
TSR3Q9UJK0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TSR3Q9UJK0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
TSR3Q9UJK0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TSR3Q9UJK0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.17■□□□□ 0.82
TSR3Q9UJK0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TSR3Q9UJK0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.17■□□□□ 0.82
TSR3Q9UJK0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TSR3Q9UJK0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
TSR3Q9UJK0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TSR3Q9UJK0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.17■□□□□ 0.82
TSR3Q9UJK0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TSR3Q9UJK0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TSR3Q9UJK0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.17■□□□□ 0.82
TSR3Q9UJK0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.17■□□□□ 0.82
TSR3Q9UJK0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.17■□□□□ 0.82
TSR3Q9UJK0 AC016405.3-201ENST00000607710 860 ntBASIC20.17■□□□□ 0.82
TSR3Q9UJK0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TSR3Q9UJK0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TSR3Q9UJK0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.17■□□□□ 0.82
TSR3Q9UJK0 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.17■□□□□ 0.82
TSR3Q9UJK0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
TSR3Q9UJK0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TSR3Q9UJK0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TSR3Q9UJK0 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TSR3Q9UJK0 AC138932.1-201ENST00000534164 6830 ntBASIC20.16■□□□□ 0.82
TSR3Q9UJK0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TSR3Q9UJK0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TSR3Q9UJK0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TSR3Q9UJK0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TSR3Q9UJK0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TSR3Q9UJK0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TSR3Q9UJK0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TSR3Q9UJK0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TSR3Q9UJK0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TSR3Q9UJK0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TSR3Q9UJK0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TSR3Q9UJK0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TSR3Q9UJK0 DUX4L16-201ENST00000555130 1264 ntBASIC20.16■□□□□ 0.82
TSR3Q9UJK0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TSR3Q9UJK0 AL137784.2-201ENST00000607332 1000 ntBASIC20.16■□□□□ 0.82
TSR3Q9UJK0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.16■□□□□ 0.82
TSR3Q9UJK0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.16■□□□□ 0.82
TSR3Q9UJK0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.16■□□□□ 0.82
TSR3Q9UJK0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.16■□□□□ 0.82
TSR3Q9UJK0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TSR3Q9UJK0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TSR3Q9UJK0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TSR3Q9UJK0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.16■□□□□ 0.82
TSR3Q9UJK0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TSR3Q9UJK0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TSR3Q9UJK0 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TSR3Q9UJK0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.15■□□□□ 0.82
TSR3Q9UJK0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.15■□□□□ 0.82
TSR3Q9UJK0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TSR3Q9UJK0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
TSR3Q9UJK0 CNN2P6-201ENST00000439038 900 ntBASIC20.15■□□□□ 0.82
TSR3Q9UJK0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.15■□□□□ 0.82
TSR3Q9UJK0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.15■□□□□ 0.82
TSR3Q9UJK0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.15■□□□□ 0.82
TSR3Q9UJK0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TSR3Q9UJK0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.15■□□□□ 0.82
TSR3Q9UJK0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TSR3Q9UJK0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.15■□□□□ 0.82
TSR3Q9UJK0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.15■□□□□ 0.82
TSR3Q9UJK0 AC013268.1-206ENST00000638368 961 ntBASIC20.15■□□□□ 0.82
TSR3Q9UJK0 AC112229.1-201ENST00000639295 961 ntBASIC20.15■□□□□ 0.82
TSR3Q9UJK0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.15■□□□□ 0.82
TSR3Q9UJK0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.15■□□□□ 0.82
TSR3Q9UJK0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.15■□□□□ 0.82
TSR3Q9UJK0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TSR3Q9UJK0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TSR3Q9UJK0 AC073130.3-201ENST00000624389 2278 ntBASIC20.15■□□□□ 0.82
TSR3Q9UJK0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TSR3Q9UJK0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TSR3Q9UJK0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TSR3Q9UJK0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TSR3Q9UJK0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TSR3Q9UJK0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms