Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.57■□□□□ 0.88
HACD3Q9P035 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HACD3Q9P035 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.57■□□□□ 0.88
HACD3Q9P035 CYP2T1P-201ENST00000432607 1285 ntBASIC20.57■□□□□ 0.88
HACD3Q9P035 CDCA4P2-201ENST00000441182 718 ntBASIC20.57■□□□□ 0.88
HACD3Q9P035 AC026185.1-201ENST00000445748 174 ntBASIC20.57■□□□□ 0.88
HACD3Q9P035 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.57■□□□□ 0.88
HACD3Q9P035 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HACD3Q9P035 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.57■□□□□ 0.88
HACD3Q9P035 AC100791.3-201ENST00000617619 330 ntBASIC20.57■□□□□ 0.88
HACD3Q9P035 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HACD3Q9P035 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HACD3Q9P035 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HACD3Q9P035 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HACD3Q9P035 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HACD3Q9P035 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
HACD3Q9P035 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.56■□□□□ 0.88
HACD3Q9P035 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HACD3Q9P035 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HACD3Q9P035 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
HACD3Q9P035 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
HACD3Q9P035 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HACD3Q9P035 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HACD3Q9P035 AC007225.1-201ENST00000566331 1836 ntBASIC20.56■□□□□ 0.88
HACD3Q9P035 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HACD3Q9P035 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HACD3Q9P035 PGM5P4-201ENST00000421970 445 ntBASIC20.56■□□□□ 0.88
HACD3Q9P035 AC005181.1-201ENST00000604782 1256 ntBASIC20.56■□□□□ 0.88
HACD3Q9P035 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.56■□□□□ 0.88
HACD3Q9P035 OR10C1-204ENST00000622521 1039 ntBASIC20.56■□□□□ 0.88
HACD3Q9P035 MIR2861-201ENST00000636310 90 ntBASIC20.56■□□□□ 0.88
HACD3Q9P035 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HACD3Q9P035 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HACD3Q9P035 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.56■□□□□ 0.88
HACD3Q9P035 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HACD3Q9P035 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HACD3Q9P035 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HACD3Q9P035 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HACD3Q9P035 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HACD3Q9P035 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HACD3Q9P035 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HACD3Q9P035 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HACD3Q9P035 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
HACD3Q9P035 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HACD3Q9P035 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HACD3Q9P035 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HACD3Q9P035 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.55■□□□□ 0.88
HACD3Q9P035 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.55■□□□□ 0.88
HACD3Q9P035 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HACD3Q9P035 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.55■□□□□ 0.88
HACD3Q9P035 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.55■□□□□ 0.88
HACD3Q9P035 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.55■□□□□ 0.88
HACD3Q9P035 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
HACD3Q9P035 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.54■□□□□ 0.88
HACD3Q9P035 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.54■□□□□ 0.88
HACD3Q9P035 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
HACD3Q9P035 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HACD3Q9P035 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HACD3Q9P035 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HACD3Q9P035 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HACD3Q9P035 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.54■□□□□ 0.88
HACD3Q9P035 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HACD3Q9P035 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.54■□□□□ 0.88
HACD3Q9P035 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HACD3Q9P035 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.54■□□□□ 0.88
HACD3Q9P035 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HACD3Q9P035 RAP2CP1-201ENST00000605103 478 ntBASIC20.54■□□□□ 0.88
HACD3Q9P035 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HACD3Q9P035 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HACD3Q9P035 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HACD3Q9P035 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.53■□□□□ 0.88
HACD3Q9P035 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HACD3Q9P035 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HACD3Q9P035 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HACD3Q9P035 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.53■□□□□ 0.88
HACD3Q9P035 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.53■□□□□ 0.88
HACD3Q9P035 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
HACD3Q9P035 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HACD3Q9P035 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.53■□□□□ 0.88
HACD3Q9P035 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.53■□□□□ 0.88
HACD3Q9P035 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HACD3Q9P035 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HACD3Q9P035 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HACD3Q9P035 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HACD3Q9P035 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HACD3Q9P035 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.53■□□□□ 0.88
HACD3Q9P035 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HACD3Q9P035 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.53■□□□□ 0.88
HACD3Q9P035 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.52■□□□□ 0.88
HACD3Q9P035 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.52■□□□□ 0.88
HACD3Q9P035 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HACD3Q9P035 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
HACD3Q9P035 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
HACD3Q9P035 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HACD3Q9P035 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
HACD3Q9P035 AC133552.2-202ENST00000575694 574 ntBASIC20.52■□□□□ 0.88
HACD3Q9P035 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
HACD3Q9P035 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HACD3Q9P035 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HACD3Q9P035 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms