Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.51■□□□□ 0.55
PCNX3Q9H6A9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCNX3Q9H6A9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PCNX3Q9H6A9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCNX3Q9H6A9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCNX3Q9H6A9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCNX3Q9H6A9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCNX3Q9H6A9 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 AL391422.3-201ENST00000603791 2761 ntBASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 CYP21A1P-202ENST00000354927 1481 ntBASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 KRT18P68-201ENST00000392293 1000 ntBASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
PCNX3Q9H6A9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PCNX3Q9H6A9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PCNX3Q9H6A9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCNX3Q9H6A9 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.48■□□□□ 0.55
PCNX3Q9H6A9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCNX3Q9H6A9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCNX3Q9H6A9 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.48■□□□□ 0.55
PCNX3Q9H6A9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCNX3Q9H6A9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PCNX3Q9H6A9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
PCNX3Q9H6A9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCNX3Q9H6A9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCNX3Q9H6A9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCNX3Q9H6A9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.48■□□□□ 0.55
PCNX3Q9H6A9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCNX3Q9H6A9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
PCNX3Q9H6A9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.48■□□□□ 0.55
PCNX3Q9H6A9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCNX3Q9H6A9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCNX3Q9H6A9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCNX3Q9H6A9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.47■□□□□ 0.55
PCNX3Q9H6A9 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCNX3Q9H6A9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.47■□□□□ 0.55
PCNX3Q9H6A9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.47■□□□□ 0.55
PCNX3Q9H6A9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PCNX3Q9H6A9 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCNX3Q9H6A9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PCNX3Q9H6A9 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.47■□□□□ 0.55
PCNX3Q9H6A9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.47■□□□□ 0.55
PCNX3Q9H6A9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.47■□□□□ 0.55
PCNX3Q9H6A9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCNX3Q9H6A9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCNX3Q9H6A9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCNX3Q9H6A9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.47■□□□□ 0.55
PCNX3Q9H6A9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.47■□□□□ 0.55
PCNX3Q9H6A9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCNX3Q9H6A9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCNX3Q9H6A9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCNX3Q9H6A9 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCNX3Q9H6A9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.46■□□□□ 0.55
PCNX3Q9H6A9 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.46■□□□□ 0.55
PCNX3Q9H6A9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.46■□□□□ 0.55
PCNX3Q9H6A9 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCNX3Q9H6A9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms