Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TRIM2Q9C040 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
TRIM2Q9C040 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.71■□□□□ 0.59
TRIM2Q9C040 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
TRIM2Q9C040 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TRIM2Q9C040 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.71■□□□□ 0.58
TRIM2Q9C040 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM2Q9C040 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TRIM2Q9C040 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM2Q9C040 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM2Q9C040 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM2Q9C040 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM2Q9C040 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM2Q9C040 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TRIM2Q9C040 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM2Q9C040 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
TRIM2Q9C040 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM2Q9C040 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRIM2Q9C040 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM2Q9C040 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM2Q9C040 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM2Q9C040 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM2Q9C040 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.7■□□□□ 0.58
TRIM2Q9C040 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM2Q9C040 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.7■□□□□ 0.58
TRIM2Q9C040 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.7■□□□□ 0.58
TRIM2Q9C040 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.7■□□□□ 0.58
TRIM2Q9C040 UBE2DNL-204ENST00000602536 740 ntBASIC18.7■□□□□ 0.58
TRIM2Q9C040 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.7■□□□□ 0.58
TRIM2Q9C040 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TRIM2Q9C040 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM2Q9C040 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM2Q9C040 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM2Q9C040 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM2Q9C040 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM2Q9C040 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM2Q9C040 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM2Q9C040 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
TRIM2Q9C040 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
TRIM2Q9C040 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM2Q9C040 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM2Q9C040 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM2Q9C040 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM2Q9C040 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM2Q9C040 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM2Q9C040 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM2Q9C040 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM2Q9C040 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM2Q9C040 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.69■□□□□ 0.58
TRIM2Q9C040 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM2Q9C040 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM2Q9C040 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRIM2Q9C040 CDV3P1-201ENST00000471403 739 ntBASIC18.69■□□□□ 0.58
TRIM2Q9C040 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM2Q9C040 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM2Q9C040 AL121603.2-201ENST00000557373 2117 ntBASIC18.69■□□□□ 0.58
TRIM2Q9C040 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM2Q9C040 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM2Q9C040 MYCNOS-205ENST00000641950 531 ntBASIC18.69■□□□□ 0.58
TRIM2Q9C040 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRIM2Q9C040 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
TRIM2Q9C040 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM2Q9C040 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.69■□□□□ 0.58
TRIM2Q9C040 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
TRIM2Q9C040 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM2Q9C040 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM2Q9C040 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM2Q9C040 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM2Q9C040 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM2Q9C040 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM2Q9C040 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM2Q9C040 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM2Q9C040 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TRIM2Q9C040 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM2Q9C040 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM2Q9C040 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM2Q9C040 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM2Q9C040 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM2Q9C040 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRIM2Q9C040 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.68■□□□□ 0.58
TRIM2Q9C040 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM2Q9C040 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM2Q9C040 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRIM2Q9C040 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM2Q9C040 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM2Q9C040 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM2Q9C040 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM2Q9C040 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM2Q9C040 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM2Q9C040 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM2Q9C040 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM2Q9C040 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TRIM2Q9C040 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRIM2Q9C040 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM2Q9C040 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM2Q9C040 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM2Q9C040 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM2Q9C040 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM2Q9C040 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM2Q9C040 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms