Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.2■□□□□ 0.34
FOXC2Q99958 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXC2Q99958 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
FOXC2Q99958 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.2■□□□□ 0.34
FOXC2Q99958 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXC2Q99958 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXC2Q99958 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
FOXC2Q99958 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FOXC2Q99958 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
FOXC2Q99958 C11orf96-202ENST00000528572 1834 ntBASIC17.19■□□□□ 0.34
FOXC2Q99958 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXC2Q99958 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXC2Q99958 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXC2Q99958 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
FOXC2Q99958 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
FOXC2Q99958 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.19■□□□□ 0.34
FOXC2Q99958 FAM197Y1-201ENST00000421178 764 ntBASIC17.19■□□□□ 0.34
FOXC2Q99958 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXC2Q99958 KRT18P57-201ENST00000443599 1254 ntBASIC17.19■□□□□ 0.34
FOXC2Q99958 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXC2Q99958 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
FOXC2Q99958 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
FOXC2Q99958 AC073195.1-201ENST00000607241 877 ntBASIC17.19■□□□□ 0.34
FOXC2Q99958 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.19■□□□□ 0.34
FOXC2Q99958 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXC2Q99958 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXC2Q99958 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
FOXC2Q99958 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXC2Q99958 AC116050.2-201ENST00000612102 1779 ntBASIC17.19■□□□□ 0.34
FOXC2Q99958 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXC2Q99958 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
FOXC2Q99958 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.19■□□□□ 0.34
FOXC2Q99958 KRT18P22-201ENST00000402024 1347 ntBASIC17.19■□□□□ 0.34
FOXC2Q99958 AC087742.1-201ENST00000575880 1738 ntBASIC17.18■□□□□ 0.34
FOXC2Q99958 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
FOXC2Q99958 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.18■□□□□ 0.34
FOXC2Q99958 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.18■□□□□ 0.34
FOXC2Q99958 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
FOXC2Q99958 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXC2Q99958 TERF1P1-201ENST00000311003 1181 ntBASIC17.18■□□□□ 0.34
FOXC2Q99958 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
FOXC2Q99958 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.18■□□□□ 0.34
FOXC2Q99958 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXC2Q99958 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
FOXC2Q99958 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.18■□□□□ 0.34
FOXC2Q99958 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
FOXC2Q99958 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
FOXC2Q99958 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
FOXC2Q99958 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.17■□□□□ 0.34
FOXC2Q99958 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXC2Q99958 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXC2Q99958 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXC2Q99958 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
FOXC2Q99958 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXC2Q99958 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXC2Q99958 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXC2Q99958 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXC2Q99958 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXC2Q99958 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXC2Q99958 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXC2Q99958 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.17■□□□□ 0.34
FOXC2Q99958 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXC2Q99958 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
FOXC2Q99958 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.17■□□□□ 0.34
FOXC2Q99958 NAPSB-206ENST00000562112 1266 ntBASIC17.17■□□□□ 0.34
FOXC2Q99958 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
FOXC2Q99958 AC087388.1-201ENST00000571370 1112 ntBASIC17.17■□□□□ 0.34
FOXC2Q99958 NTF6B-201ENST00000591913 560 ntBASIC17.17■□□□□ 0.34
FOXC2Q99958 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXC2Q99958 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
FOXC2Q99958 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXC2Q99958 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXC2Q99958 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
FOXC2Q99958 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXC2Q99958 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
FOXC2Q99958 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FOXC2Q99958 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.16■□□□□ 0.34
FOXC2Q99958 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.16■□□□□ 0.34
FOXC2Q99958 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.16■□□□□ 0.34
FOXC2Q99958 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
FOXC2Q99958 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXC2Q99958 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXC2Q99958 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXC2Q99958 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
FOXC2Q99958 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
FOXC2Q99958 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.16■□□□□ 0.34
FOXC2Q99958 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.16■□□□□ 0.34
FOXC2Q99958 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
FOXC2Q99958 DUX4L26-201ENST00000489078 1255 ntBASIC17.16■□□□□ 0.34
FOXC2Q99958 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
FOXC2Q99958 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.16■□□□□ 0.34
FOXC2Q99958 NUDT16P1-203ENST00000513809 620 ntBASIC17.16■□□□□ 0.34
FOXC2Q99958 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
FOXC2Q99958 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.16■□□□□ 0.34
FOXC2Q99958 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.16■□□□□ 0.34
FOXC2Q99958 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.16■□□□□ 0.34
FOXC2Q99958 AL031963.3-201ENST00000606441 850 ntBASIC17.16■□□□□ 0.34
FOXC2Q99958 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.16■□□□□ 0.34
FOXC2Q99958 AL121829.2-201ENST00000620908 328 ntBASIC17.16■□□□□ 0.34
FOXC2Q99958 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms