Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.27■□□□□ 0.35
CCL19Q99731 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCL19Q99731 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CCL19Q99731 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL19Q99731 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL19Q99731 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL19Q99731 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL19Q99731 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.26■□□□□ 0.35
CCL19Q99731 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL19Q99731 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL19Q99731 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL19Q99731 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.26■□□□□ 0.35
CCL19Q99731 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL19Q99731 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.26■□□□□ 0.35
CCL19Q99731 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.26■□□□□ 0.35
CCL19Q99731 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL19Q99731 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL19Q99731 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL19Q99731 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL19Q99731 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL19Q99731 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL19Q99731 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL19Q99731 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL19Q99731 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL19Q99731 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.25■□□□□ 0.35
CCL19Q99731 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.25■□□□□ 0.35
CCL19Q99731 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.25■□□□□ 0.35
CCL19Q99731 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCL19Q99731 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCL19Q99731 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.25■□□□□ 0.35
CCL19Q99731 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.25■□□□□ 0.35
CCL19Q99731 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.25■□□□□ 0.35
CCL19Q99731 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.25■□□□□ 0.35
CCL19Q99731 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL19Q99731 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.25■□□□□ 0.35
CCL19Q99731 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL19Q99731 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.25■□□□□ 0.35
CCL19Q99731 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCL19Q99731 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL19Q99731 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL19Q99731 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL19Q99731 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL19Q99731 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.24■□□□□ 0.35
CCL19Q99731 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.24■□□□□ 0.35
CCL19Q99731 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CCL19Q99731 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL19Q99731 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL19Q99731 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL19Q99731 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL19Q99731 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL19Q99731 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL19Q99731 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL19Q99731 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCL19Q99731 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.24■□□□□ 0.35
CCL19Q99731 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL19Q99731 AL355075.4-201ENST00000554988 638 ntBASIC17.24■□□□□ 0.35
CCL19Q99731 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.24■□□□□ 0.35
CCL19Q99731 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCL19Q99731 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CCL19Q99731 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.24■□□□□ 0.35
CCL19Q99731 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL19Q99731 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.24■□□□□ 0.35
CCL19Q99731 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCL19Q99731 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL19Q99731 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL19Q99731 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL19Q99731 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL19Q99731 AC242852.2-201ENST00000615738 1807 ntBASIC17.24■□□□□ 0.35
CCL19Q99731 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCL19Q99731 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCL19Q99731 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL19Q99731 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL19Q99731 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL19Q99731 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.23■□□□□ 0.35
CCL19Q99731 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCL19Q99731 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL19Q99731 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCL19Q99731 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.23■□□□□ 0.35
CCL19Q99731 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.23■□□□□ 0.35
CCL19Q99731 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL19Q99731 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.23■□□□□ 0.35
CCL19Q99731 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL19Q99731 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL19Q99731 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCL19Q99731 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCL19Q99731 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL19Q99731 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCL19Q99731 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CCL19Q99731 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL19Q99731 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL19Q99731 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL19Q99731 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL19Q99731 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.22■□□□□ 0.35
CCL19Q99731 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL19Q99731 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL19Q99731 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL19Q99731 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL19Q99731 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL19Q99731 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCL19Q99731 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms