Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 YIL082WYIL082W 873 nt1.21□□□□□ -2.22
ATG40Q99325 ACF4YJR083C 930 nt1.21□□□□□ -2.22
ATG40Q99325 CDC31YOR257W 486 nt1.21□□□□□ -2.22
ATG40Q99325 SFB2YNL049C 2631 nt1.21□□□□□ -2.22
ATG40Q99325 CRM1YGR218W 3255 nt1.21□□□□□ -2.22
ATG40Q99325 YDR261W-AYDR261W-A 1317 nt1.2□□□□□ -2.22
ATG40Q99325 YDL009CYDL009C 324 nt1.2□□□□□ -2.22
ATG40Q99325 IRC2YDR112W 309 nt1.2□□□□□ -2.22
ATG40Q99325 MZM1YDR493W 372 nt1.2□□□□□ -2.22
ATG40Q99325 TMA20YER007C-A 546 nt1.2□□□□□ -2.22
ATG40Q99325 FAR7YFR008W 666 nt1.2□□□□□ -2.22
ATG40Q99325 YAL066WYAL066W 309 nt1.2□□□□□ -2.22
ATG40Q99325 YMR230W-AYMR230W-A 189 nt1.2□□□□□ -2.22
ATG40Q99325 YOR105WYOR105W 327 nt1.2□□□□□ -2.22
ATG40Q99325 KCS1YDR017C 3153 nt1.2□□□□□ -2.22
ATG40Q99325 RPH1YER169W 2391 nt1.19□□□□□ -2.22
ATG40Q99325 YGR115CYGR115C 780 nt1.19□□□□□ -2.22
ATG40Q99325 tQ(UUG)E2tQ(UUG)E2 72 nt1.19□□□□□ -2.22
ATG40Q99325 YJL119CYJL119C 324 nt1.19□□□□□ -2.22
ATG40Q99325 TRX1YLR043C 312 nt1.19□□□□□ -2.22
ATG40Q99325 YLR198CYLR198C 360 nt1.19□□□□□ -2.22
ATG40Q99325 CYB5YNL111C 363 nt1.19□□□□□ -2.22
ATG40Q99325 YOR019WYOR019W 2193 nt1.19□□□□□ -2.22
ATG40Q99325 SPC29YPL124W 762 nt1.19□□□□□ -2.22
ATG40Q99325 LAA1YJL207C 6045 nt1.19□□□□□ -2.22
ATG40Q99325 TBS1YBR150C 3285 nt1.18□□□□□ -2.22
ATG40Q99325 MUD2YKL074C 1584 nt1.18□□□□□ -2.22
ATG40Q99325 YEL057CYEL057C 702 nt1.18□□□□□ -2.22
ATG40Q99325 BUD19YJL188C 309 nt1.18□□□□□ -2.22
ATG40Q99325 RPS7BYNL096C 573 nt1.18□□□□□ -2.22
ATG40Q99325 PIK1YNL267W 3201 nt1.18□□□□□ -2.22
ATG40Q99325 LYS9YNR050C 1341 nt1.17□□□□□ -2.22
ATG40Q99325 GRR1YJR090C 3456 nt1.17□□□□□ -2.22
ATG40Q99325 YDL041WYDL041W 354 nt1.17□□□□□ -2.22
ATG40Q99325 YER038W-AYER038W-A 381 nt1.17□□□□□ -2.22
ATG40Q99325 ARV1YLR242C 966 nt1.17□□□□□ -2.22
ATG40Q99325 YPT6YLR262C 648 nt1.17□□□□□ -2.22
ATG40Q99325 YNL010WYNL010W 726 nt1.17□□□□□ -2.22
ATG40Q99325 RTC6YPL183W-A 282 nt1.17□□□□□ -2.22
ATG40Q99325 YPR170CYPR170C 336 nt1.17□□□□□ -2.22
ATG40Q99325 POP7YBR167C 423 nt1.17□□□□□ -2.22
ATG40Q99325 APM3YBR288C 1452 nt1.17□□□□□ -2.22
ATG40Q99325 CDC27YBL084C 2277 nt1.17□□□□□ -2.22
ATG40Q99325 PMD1YER132C 5262 nt1.17□□□□□ -2.22
ATG40Q99325 PHR1YOR386W 1698 nt1.16□□□□□ -2.22
ATG40Q99325 SPE1YKL184W 1401 nt1.16□□□□□ -2.22
ATG40Q99325 BNA7YDR428C 786 nt1.16□□□□□ -2.22
ATG40Q99325 YIL030W-AYIL030W-A 339 nt1.16□□□□□ -2.22
ATG40Q99325 YLR285C-AYLR285C-A 171 nt1.16□□□□□ -2.22
ATG40Q99325 YNL150WYNL150W 408 nt1.16□□□□□ -2.22
ATG40Q99325 PHO80YOL001W 882 nt1.16□□□□□ -2.22
ATG40Q99325 DCP1YOL149W 696 nt1.16□□□□□ -2.22
ATG40Q99325 SNC2YOR327C 348 nt1.16□□□□□ -2.22
ATG40Q99325 YBR287WYBR287W 1284 nt1.16□□□□□ -2.22
ATG40Q99325 ASM4YDL088C 1587 nt1.16□□□□□ -2.22
ATG40Q99325 CDC25YLR310C 4770 nt1.16□□□□□ -2.22
ATG40Q99325 SEC63YOR254C 1992 nt1.16□□□□□ -2.22
ATG40Q99325 SXM1YDR395W 2835 nt1.16□□□□□ -2.22
ATG40Q99325 KIP1YBL063W 3336 nt1.15□□□□□ -2.23
ATG40Q99325 snR5snR5 204 nt1.15□□□□□ -2.23
ATG40Q99325 VOA1YGR106C 798 nt1.15□□□□□ -2.23
ATG40Q99325 FSH1YHR049W 732 nt1.15□□□□□ -2.23
ATG40Q99325 GIC1YHR061C 945 nt1.15□□□□□ -2.23
ATG40Q99325 BET4YJL031C 984 nt1.15□□□□□ -2.23
ATG40Q99325 YMR304C-AYMR304C-A 351 nt1.15□□□□□ -2.23
ATG40Q99325 DPB11YJL090C 2295 nt1.14□□□□□ -2.23
ATG40Q99325 YGL109WYGL109W 324 nt1.14□□□□□ -2.23
ATG40Q99325 TAD1YGL243W 1203 nt1.14□□□□□ -2.23
ATG40Q99325 LAG1YHL003C 1236 nt1.14□□□□□ -2.23
ATG40Q99325 YHL037CYHL037C 402 nt1.14□□□□□ -2.23
ATG40Q99325 TIM8YJR135W-A 264 nt1.14□□□□□ -2.23
ATG40Q99325 YMR324CYMR324C 243 nt1.14□□□□□ -2.23
ATG40Q99325 YOR364WYOR364W 369 nt1.14□□□□□ -2.23
ATG40Q99325 YBR063CYBR063C 1215 nt1.14□□□□□ -2.23
ATG40Q99325 SPO24YPR036W-A 204 nt1.14□□□□□ -2.23
ATG40Q99325 ROX1YPR065W 1107 nt1.14□□□□□ -2.23
ATG40Q99325 RRI2YOL117W 1938 nt1.14□□□□□ -2.23
ATG40Q99325 RIC1YLR039C 3171 nt1.14□□□□□ -2.23
ATG40Q99325 YJR098CYJR098C 1971 nt1.14□□□□□ -2.23
ATG40Q99325 MDM20YOL076W 2391 nt1.13□□□□□ -2.23
ATG40Q99325 SDS22YKL193C 1017 nt1.13□□□□□ -2.23
ATG40Q99325 YLR366WYLR366W 306 nt1.13□□□□□ -2.23
ATG40Q99325 URA10YMR271C 684 nt1.13□□□□□ -2.23
ATG40Q99325 NOT5YPR072W 1683 nt1.13□□□□□ -2.23
ATG40Q99325 PBY1YBR094W 2262 nt1.13□□□□□ -2.23
ATG40Q99325 NUP82YJL061W 2142 nt1.12□□□□□ -2.23
ATG40Q99325 tH(GUG)E1tH(GUG)E1 72 nt1.12□□□□□ -2.23
ATG40Q99325 tH(GUG)E2tH(GUG)E2 72 nt1.12□□□□□ -2.23
ATG40Q99325 tH(GUG)G1tH(GUG)G1 72 nt1.12□□□□□ -2.23
ATG40Q99325 tH(GUG)G2tH(GUG)G2 72 nt1.12□□□□□ -2.23
ATG40Q99325 tH(GUG)HtH(GUG)H 72 nt1.12□□□□□ -2.23
ATG40Q99325 tH(GUG)KtH(GUG)K 72 nt1.12□□□□□ -2.23
ATG40Q99325 tH(GUG)MtH(GUG)M 72 nt1.12□□□□□ -2.23
ATG40Q99325 YBL083CYBL083C 426 nt1.12□□□□□ -2.23
ATG40Q99325 YPL080CYPL080C 327 nt1.12□□□□□ -2.23
ATG40Q99325 YPR172WYPR172W 603 nt1.12□□□□□ -2.23
ATG40Q99325 ZRG8YER033C 3231 nt1.11□□□□□ -2.23
ATG40Q99325 RTR2YDR066C 591 nt1.11□□□□□ -2.23
ATG40Q99325 LSO2YGR169C-A 279 nt1.11□□□□□ -2.23
ATG40Q99325 RNR4YGR180C 1038 nt1.11□□□□□ -2.23
Retrieved 100 of 7,029 protein–RNA pairs in 19.9 ms