Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
NEK1Q96PY6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
NEK1Q96PY6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
NEK1Q96PY6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
NEK1Q96PY6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
NEK1Q96PY6 CYP2T1P-201ENST00000432607 1285 ntBASIC24.13■■□□□ 1.45
NEK1Q96PY6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC24.13■■□□□ 1.45
NEK1Q96PY6 AL137784.2-201ENST00000607332 1000 ntBASIC24.13■■□□□ 1.45
NEK1Q96PY6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC24.13■■□□□ 1.45
NEK1Q96PY6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC24.13■■□□□ 1.45
NEK1Q96PY6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NEK1Q96PY6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
NEK1Q96PY6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC24.13■■□□□ 1.45
NEK1Q96PY6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC24.13■■□□□ 1.45
NEK1Q96PY6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
NEK1Q96PY6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
NEK1Q96PY6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
NEK1Q96PY6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC24.12■■□□□ 1.45
NEK1Q96PY6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
NEK1Q96PY6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
NEK1Q96PY6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
NEK1Q96PY6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC24.12■■□□□ 1.45
NEK1Q96PY6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
NEK1Q96PY6 AC087633.2-202ENST00000565166 1439 ntBASIC24.12■■□□□ 1.45
NEK1Q96PY6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
NEK1Q96PY6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
NEK1Q96PY6 AL162377.1-201ENST00000618844 1793 ntBASIC24.12■■□□□ 1.45
NEK1Q96PY6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
NEK1Q96PY6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
NEK1Q96PY6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC24.12■■□□□ 1.45
NEK1Q96PY6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC24.12■■□□□ 1.45
NEK1Q96PY6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
NEK1Q96PY6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
NEK1Q96PY6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC24.12■■□□□ 1.45
NEK1Q96PY6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC24.12■■□□□ 1.45
NEK1Q96PY6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
NEK1Q96PY6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NEK1Q96PY6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NEK1Q96PY6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC24.11■■□□□ 1.45
NEK1Q96PY6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
NEK1Q96PY6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC24.11■■□□□ 1.45
NEK1Q96PY6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NEK1Q96PY6 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC24.11■■□□□ 1.45
NEK1Q96PY6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
NEK1Q96PY6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NEK1Q96PY6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NEK1Q96PY6 AC073111.5-205ENST00000641717 521 ntBASIC24.11■■□□□ 1.45
NEK1Q96PY6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.11■■□□□ 1.45
NEK1Q96PY6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
NEK1Q96PY6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
NEK1Q96PY6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC24.1■■□□□ 1.45
NEK1Q96PY6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC24.1■■□□□ 1.45
NEK1Q96PY6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC24.1■■□□□ 1.45
NEK1Q96PY6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.1■■□□□ 1.45
NEK1Q96PY6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.1■■□□□ 1.45
NEK1Q96PY6 AL356652.1-201ENST00000615962 565 ntBASIC24.1■■□□□ 1.45
NEK1Q96PY6 AC100791.3-201ENST00000617619 330 ntBASIC24.1■■□□□ 1.45
NEK1Q96PY6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC24.1■■□□□ 1.45
NEK1Q96PY6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NEK1Q96PY6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC24.1■■□□□ 1.45
NEK1Q96PY6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
NEK1Q96PY6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
NEK1Q96PY6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NEK1Q96PY6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC24.1■■□□□ 1.45
NEK1Q96PY6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NEK1Q96PY6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NEK1Q96PY6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NEK1Q96PY6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
NEK1Q96PY6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
NEK1Q96PY6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
NEK1Q96PY6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
NEK1Q96PY6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
NEK1Q96PY6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
NEK1Q96PY6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
NEK1Q96PY6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
NEK1Q96PY6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
NEK1Q96PY6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC24.09■■□□□ 1.45
NEK1Q96PY6 PGM5P4-201ENST00000421970 445 ntBASIC24.09■■□□□ 1.45
NEK1Q96PY6 CDCA4P2-201ENST00000441182 718 ntBASIC24.09■■□□□ 1.45
NEK1Q96PY6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.09■■□□□ 1.45
NEK1Q96PY6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
NEK1Q96PY6 AC069236.1-201ENST00000604339 616 ntBASIC24.09■■□□□ 1.45
NEK1Q96PY6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.09■■□□□ 1.45
NEK1Q96PY6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
NEK1Q96PY6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC24.09■■□□□ 1.45
NEK1Q96PY6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
NEK1Q96PY6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
NEK1Q96PY6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC24.09■■□□□ 1.45
NEK1Q96PY6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
NEK1Q96PY6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
NEK1Q96PY6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
NEK1Q96PY6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
NEK1Q96PY6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
NEK1Q96PY6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
NEK1Q96PY6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
NEK1Q96PY6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC24.08■■□□□ 1.45
NEK1Q96PY6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC24.08■■□□□ 1.45
NEK1Q96PY6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
NEK1Q96PY6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
NEK1Q96PY6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms