Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 Z99916.2-201ENST00000604037 246 ntBASIC20.46■□□□□ 0.87
SIPA1Q96FS4 MTDHP1-201ENST00000605323 784 ntBASIC20.46■□□□□ 0.87
SIPA1Q96FS4 AC012676.1-201ENST00000574705 1949 ntBASIC20.46■□□□□ 0.87
SIPA1Q96FS4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 AC011484.1-201ENST00000377652 1995 ntBASIC20.46■□□□□ 0.87
SIPA1Q96FS4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SIPA1Q96FS4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
SIPA1Q96FS4 AC244015.2-201ENST00000616358 1861 ntBASIC20.45■□□□□ 0.86
SIPA1Q96FS4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SIPA1Q96FS4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SIPA1Q96FS4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SIPA1Q96FS4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SIPA1Q96FS4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SIPA1Q96FS4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.45■□□□□ 0.86
SIPA1Q96FS4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SIPA1Q96FS4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.45■□□□□ 0.86
SIPA1Q96FS4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SIPA1Q96FS4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SIPA1Q96FS4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SIPA1Q96FS4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SIPA1Q96FS4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.45■□□□□ 0.86
SIPA1Q96FS4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.45■□□□□ 0.86
SIPA1Q96FS4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.45■□□□□ 0.86
SIPA1Q96FS4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SIPA1Q96FS4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.45■□□□□ 0.86
SIPA1Q96FS4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SIPA1Q96FS4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 MIR4497-201ENST00000583208 89 ntBASIC20.44■□□□□ 0.86
SIPA1Q96FS4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SIPA1Q96FS4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.43■□□□□ 0.86
SIPA1Q96FS4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIPA1Q96FS4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
SIPA1Q96FS4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.43■□□□□ 0.86
SIPA1Q96FS4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.43■□□□□ 0.86
SIPA1Q96FS4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
SIPA1Q96FS4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.43■□□□□ 0.86
SIPA1Q96FS4 AL023875.1-201ENST00000640777 796 ntBASIC20.43■□□□□ 0.86
SIPA1Q96FS4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SIPA1Q96FS4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
SIPA1Q96FS4 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SIPA1Q96FS4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.43■□□□□ 0.86
SIPA1Q96FS4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SIPA1Q96FS4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms