Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
GRAMD1AQ96CP6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GRAMD1AQ96CP6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GRAMD1AQ96CP6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GRAMD1AQ96CP6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GRAMD1AQ96CP6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GRAMD1AQ96CP6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GRAMD1AQ96CP6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
GRAMD1AQ96CP6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GRAMD1AQ96CP6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GRAMD1AQ96CP6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GRAMD1AQ96CP6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.81■□□□□ 0.92
GRAMD1AQ96CP6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.81■□□□□ 0.92
GRAMD1AQ96CP6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
GRAMD1AQ96CP6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GRAMD1AQ96CP6 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.81■□□□□ 0.92
GRAMD1AQ96CP6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
GRAMD1AQ96CP6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GRAMD1AQ96CP6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
GRAMD1AQ96CP6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.81■□□□□ 0.92
GRAMD1AQ96CP6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GRAMD1AQ96CP6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
GRAMD1AQ96CP6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GRAMD1AQ96CP6 AC020907.5-201ENST00000624372 1936 ntBASIC20.8■□□□□ 0.92
GRAMD1AQ96CP6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.8■□□□□ 0.92
GRAMD1AQ96CP6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GRAMD1AQ96CP6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GRAMD1AQ96CP6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
GRAMD1AQ96CP6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
GRAMD1AQ96CP6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.8■□□□□ 0.92
GRAMD1AQ96CP6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
GRAMD1AQ96CP6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GRAMD1AQ96CP6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GRAMD1AQ96CP6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.8■□□□□ 0.92
GRAMD1AQ96CP6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
GRAMD1AQ96CP6 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GRAMD1AQ96CP6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
GRAMD1AQ96CP6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GRAMD1AQ96CP6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GRAMD1AQ96CP6 AC027702.1-201ENST00000563810 1770 ntBASIC20.8■□□□□ 0.92
GRAMD1AQ96CP6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
GRAMD1AQ96CP6 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GRAMD1AQ96CP6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GRAMD1AQ96CP6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GRAMD1AQ96CP6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GRAMD1AQ96CP6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GRAMD1AQ96CP6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.79■□□□□ 0.92
GRAMD1AQ96CP6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
GRAMD1AQ96CP6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GRAMD1AQ96CP6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.79■□□□□ 0.92
GRAMD1AQ96CP6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.79■□□□□ 0.92
GRAMD1AQ96CP6 MFSD11-216ENST00000590393 1141 ntBASIC20.79■□□□□ 0.92
GRAMD1AQ96CP6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
GRAMD1AQ96CP6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GRAMD1AQ96CP6 AC005224.4-201ENST00000583262 1652 ntBASIC20.79■□□□□ 0.92
GRAMD1AQ96CP6 PCDHAC2-203ENST00000615316 3011 ntBASIC20.79■□□□□ 0.92
GRAMD1AQ96CP6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GRAMD1AQ96CP6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
GRAMD1AQ96CP6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
GRAMD1AQ96CP6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GRAMD1AQ96CP6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GRAMD1AQ96CP6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GRAMD1AQ96CP6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.78■□□□□ 0.92
GRAMD1AQ96CP6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GRAMD1AQ96CP6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GRAMD1AQ96CP6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
GRAMD1AQ96CP6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GRAMD1AQ96CP6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GRAMD1AQ96CP6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GRAMD1AQ96CP6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.78■□□□□ 0.92
GRAMD1AQ96CP6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GRAMD1AQ96CP6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
GRAMD1AQ96CP6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.78■□□□□ 0.92
GRAMD1AQ96CP6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
GRAMD1AQ96CP6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.78■□□□□ 0.92
GRAMD1AQ96CP6 CD99P1-205ENST00000527459 561 ntBASIC20.78■□□□□ 0.92
GRAMD1AQ96CP6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GRAMD1AQ96CP6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.78■□□□□ 0.92
GRAMD1AQ96CP6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
GRAMD1AQ96CP6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GRAMD1AQ96CP6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GRAMD1AQ96CP6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
GRAMD1AQ96CP6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.77■□□□□ 0.92
GRAMD1AQ96CP6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
GRAMD1AQ96CP6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
GRAMD1AQ96CP6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
GRAMD1AQ96CP6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GRAMD1AQ96CP6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.77■□□□□ 0.92
GRAMD1AQ96CP6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GRAMD1AQ96CP6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
GRAMD1AQ96CP6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GRAMD1AQ96CP6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GRAMD1AQ96CP6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
GRAMD1AQ96CP6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GRAMD1AQ96CP6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GRAMD1AQ96CP6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GRAMD1AQ96CP6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
GRAMD1AQ96CP6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.77■□□□□ 0.92
GRAMD1AQ96CP6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
GRAMD1AQ96CP6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms