Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCHCR1Q8TD31 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCHCR1Q8TD31 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCHCR1Q8TD31 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCHCR1Q8TD31 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
CCHCR1Q8TD31 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCHCR1Q8TD31 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.17■□□□□ 0.98
CCHCR1Q8TD31 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CCHCR1Q8TD31 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCHCR1Q8TD31 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCHCR1Q8TD31 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCHCR1Q8TD31 AL512408.1-201ENST00000569378 2000 ntBASIC21.16■□□□□ 0.98
CCHCR1Q8TD31 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCHCR1Q8TD31 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCHCR1Q8TD31 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.16■□□□□ 0.98
CCHCR1Q8TD31 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCHCR1Q8TD31 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CCHCR1Q8TD31 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.16■□□□□ 0.98
CCHCR1Q8TD31 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCHCR1Q8TD31 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CCHCR1Q8TD31 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.16■□□□□ 0.98
CCHCR1Q8TD31 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCHCR1Q8TD31 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCHCR1Q8TD31 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCHCR1Q8TD31 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCHCR1Q8TD31 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCHCR1Q8TD31 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.16■□□□□ 0.98
CCHCR1Q8TD31 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCHCR1Q8TD31 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCHCR1Q8TD31 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCHCR1Q8TD31 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.15■□□□□ 0.98
CCHCR1Q8TD31 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.15■□□□□ 0.98
CCHCR1Q8TD31 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCHCR1Q8TD31 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCHCR1Q8TD31 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCHCR1Q8TD31 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.15■□□□□ 0.98
CCHCR1Q8TD31 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.15■□□□□ 0.98
CCHCR1Q8TD31 AC138907.5-202ENST00000569484 235 ntBASIC21.15■□□□□ 0.98
CCHCR1Q8TD31 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.15■□□□□ 0.98
CCHCR1Q8TD31 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCHCR1Q8TD31 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCHCR1Q8TD31 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCHCR1Q8TD31 AC092720.2-201ENST00000602388 1665 ntBASIC21.15■□□□□ 0.98
CCHCR1Q8TD31 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCHCR1Q8TD31 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CCHCR1Q8TD31 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCHCR1Q8TD31 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCHCR1Q8TD31 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCHCR1Q8TD31 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCHCR1Q8TD31 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CCHCR1Q8TD31 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CCHCR1Q8TD31 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCHCR1Q8TD31 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCHCR1Q8TD31 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CCHCR1Q8TD31 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCHCR1Q8TD31 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCHCR1Q8TD31 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCHCR1Q8TD31 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.13■□□□□ 0.97
CCHCR1Q8TD31 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCHCR1Q8TD31 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCHCR1Q8TD31 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.13■□□□□ 0.97
CCHCR1Q8TD31 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.13■□□□□ 0.97
CCHCR1Q8TD31 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCHCR1Q8TD31 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCHCR1Q8TD31 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCHCR1Q8TD31 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCHCR1Q8TD31 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CCHCR1Q8TD31 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.13■□□□□ 0.97
CCHCR1Q8TD31 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CCHCR1Q8TD31 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.13■□□□□ 0.97
CCHCR1Q8TD31 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 AP001160.3-201ENST00000601484 763 ntBASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CCHCR1Q8TD31 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCHCR1Q8TD31 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CCHCR1Q8TD31 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCHCR1Q8TD31 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCHCR1Q8TD31 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms