Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDND2Q8NHS1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.28■□□□□ 0.36
CLDND2Q8NHS1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDND2Q8NHS1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDND2Q8NHS1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.28■□□□□ 0.36
CLDND2Q8NHS1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDND2Q8NHS1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDND2Q8NHS1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDND2Q8NHS1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDND2Q8NHS1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDND2Q8NHS1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDND2Q8NHS1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CLDND2Q8NHS1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.28■□□□□ 0.36
CLDND2Q8NHS1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLDND2Q8NHS1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLDND2Q8NHS1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLDND2Q8NHS1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
CLDND2Q8NHS1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDND2Q8NHS1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDND2Q8NHS1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.27■□□□□ 0.36
CLDND2Q8NHS1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CLDND2Q8NHS1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDND2Q8NHS1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLDND2Q8NHS1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CLDND2Q8NHS1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDND2Q8NHS1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CLDND2Q8NHS1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.27■□□□□ 0.36
CLDND2Q8NHS1 AC100791.3-201ENST00000617619 330 ntBASIC17.27■□□□□ 0.36
CLDND2Q8NHS1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CLDND2Q8NHS1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CLDND2Q8NHS1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDND2Q8NHS1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDND2Q8NHS1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLDND2Q8NHS1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDND2Q8NHS1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CLDND2Q8NHS1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLDND2Q8NHS1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CLDND2Q8NHS1 KRT17P1-201ENST00000399211 1546 ntBASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 CYP2T3P-201ENST00000601990 817 ntBASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDND2Q8NHS1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDND2Q8NHS1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDND2Q8NHS1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDND2Q8NHS1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDND2Q8NHS1 KRT18P29-201ENST00000397031 1267 ntBASIC17.25■□□□□ 0.35
CLDND2Q8NHS1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.25■□□□□ 0.35
CLDND2Q8NHS1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDND2Q8NHS1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.25■□□□□ 0.35
CLDND2Q8NHS1 AC007322.3-201ENST00000426526 701 ntBASIC17.25■□□□□ 0.35
CLDND2Q8NHS1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.25■□□□□ 0.35
CLDND2Q8NHS1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.25■□□□□ 0.35
CLDND2Q8NHS1 ITM2C-210ENST00000620962 501 ntBASIC17.25■□□□□ 0.35
CLDND2Q8NHS1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDND2Q8NHS1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDND2Q8NHS1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.25■□□□□ 0.35
CLDND2Q8NHS1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDND2Q8NHS1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDND2Q8NHS1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDND2Q8NHS1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDND2Q8NHS1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDND2Q8NHS1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDND2Q8NHS1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
CLDND2Q8NHS1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDND2Q8NHS1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDND2Q8NHS1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDND2Q8NHS1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDND2Q8NHS1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDND2Q8NHS1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDND2Q8NHS1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CLDND2Q8NHS1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDND2Q8NHS1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDND2Q8NHS1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDND2Q8NHS1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDND2Q8NHS1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDND2Q8NHS1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDND2Q8NHS1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDND2Q8NHS1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDND2Q8NHS1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDND2Q8NHS1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms