Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP43Q8NFH3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUP43Q8NFH3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUP43Q8NFH3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUP43Q8NFH3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NUP43Q8NFH3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUP43Q8NFH3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUP43Q8NFH3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.05■□□□□ 0.64
NUP43Q8NFH3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.05■□□□□ 0.64
NUP43Q8NFH3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.05■□□□□ 0.64
NUP43Q8NFH3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.05■□□□□ 0.64
NUP43Q8NFH3 KRT8P36-201ENST00000489121 1440 ntBASIC19.05■□□□□ 0.64
NUP43Q8NFH3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUP43Q8NFH3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.05■□□□□ 0.64
NUP43Q8NFH3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.05■□□□□ 0.64
NUP43Q8NFH3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUP43Q8NFH3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 AL162412.1-201ENST00000567129 965 ntBASIC19.04■□□□□ 0.64
NUP43Q8NFH3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 AL512408.1-201ENST00000569378 2000 ntBASIC19.04■□□□□ 0.64
NUP43Q8NFH3 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 AC016405.3-201ENST00000607710 860 ntBASIC19.04■□□□□ 0.64
NUP43Q8NFH3 BID-214ENST00000617586 542 ntTSL 5 BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NUP43Q8NFH3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.03■□□□□ 0.64
NUP43Q8NFH3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUP43Q8NFH3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.03■□□□□ 0.64
NUP43Q8NFH3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.03■□□□□ 0.64
NUP43Q8NFH3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.03■□□□□ 0.64
NUP43Q8NFH3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
NUP43Q8NFH3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NUP43Q8NFH3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.03■□□□□ 0.64
NUP43Q8NFH3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUP43Q8NFH3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUP43Q8NFH3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.03■□□□□ 0.64
NUP43Q8NFH3 AC022517.1-201ENST00000592429 346 ntBASIC19.03■□□□□ 0.64
NUP43Q8NFH3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.03■□□□□ 0.64
NUP43Q8NFH3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUP43Q8NFH3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.03■□□□□ 0.64
NUP43Q8NFH3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.03■□□□□ 0.64
NUP43Q8NFH3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUP43Q8NFH3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.03■□□□□ 0.64
NUP43Q8NFH3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUP43Q8NFH3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUP43Q8NFH3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUP43Q8NFH3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUP43Q8NFH3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NUP43Q8NFH3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NUP43Q8NFH3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NUP43Q8NFH3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.02■□□□□ 0.64
NUP43Q8NFH3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NUP43Q8NFH3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NUP43Q8NFH3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
NUP43Q8NFH3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NUP43Q8NFH3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NUP43Q8NFH3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NUP43Q8NFH3 CNN2P6-201ENST00000439038 900 ntBASIC19.02■□□□□ 0.64
NUP43Q8NFH3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.02■□□□□ 0.64
NUP43Q8NFH3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.02■□□□□ 0.64
NUP43Q8NFH3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.02■□□□□ 0.64
NUP43Q8NFH3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
NUP43Q8NFH3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NUP43Q8NFH3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NUP43Q8NFH3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.63
NUP43Q8NFH3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NUP43Q8NFH3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.01■□□□□ 0.63
NUP43Q8NFH3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUP43Q8NFH3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUP43Q8NFH3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUP43Q8NFH3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms