Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRFBP1Q8NEF9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRFBP1Q8NEF9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.41■□□□□ 0.7
SRFBP1Q8NEF9 KRT8P36-201ENST00000489121 1440 ntBASIC19.41■□□□□ 0.7
SRFBP1Q8NEF9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRFBP1Q8NEF9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SRFBP1Q8NEF9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.4■□□□□ 0.7
SRFBP1Q8NEF9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRFBP1Q8NEF9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SRFBP1Q8NEF9 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRFBP1Q8NEF9 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRFBP1Q8NEF9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.4■□□□□ 0.7
SRFBP1Q8NEF9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SRFBP1Q8NEF9 AL356652.1-201ENST00000615962 565 ntBASIC19.4■□□□□ 0.7
SRFBP1Q8NEF9 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.4■□□□□ 0.7
SRFBP1Q8NEF9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SRFBP1Q8NEF9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRFBP1Q8NEF9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.4■□□□□ 0.7
SRFBP1Q8NEF9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRFBP1Q8NEF9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRFBP1Q8NEF9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.7
SRFBP1Q8NEF9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
SRFBP1Q8NEF9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SRFBP1Q8NEF9 FEM1AP1-201ENST00000431297 1995 ntBASIC19.39■□□□□ 0.7
SRFBP1Q8NEF9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRFBP1Q8NEF9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRFBP1Q8NEF9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.39■□□□□ 0.69
SRFBP1Q8NEF9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.39■□□□□ 0.69
SRFBP1Q8NEF9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.39■□□□□ 0.69
SRFBP1Q8NEF9 RAP2CP1-201ENST00000605103 478 ntBASIC19.39■□□□□ 0.69
SRFBP1Q8NEF9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRFBP1Q8NEF9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
SRFBP1Q8NEF9 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SRFBP1Q8NEF9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRFBP1Q8NEF9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SRFBP1Q8NEF9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRFBP1Q8NEF9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.39■□□□□ 0.69
SRFBP1Q8NEF9 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SRFBP1Q8NEF9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SRFBP1Q8NEF9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRFBP1Q8NEF9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRFBP1Q8NEF9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRFBP1Q8NEF9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRFBP1Q8NEF9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SRFBP1Q8NEF9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.38■□□□□ 0.69
SRFBP1Q8NEF9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SRFBP1Q8NEF9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRFBP1Q8NEF9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SRFBP1Q8NEF9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SRFBP1Q8NEF9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.38■□□□□ 0.69
SRFBP1Q8NEF9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SRFBP1Q8NEF9 AC092720.2-201ENST00000602388 1665 ntBASIC19.38■□□□□ 0.69
SRFBP1Q8NEF9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.38■□□□□ 0.69
SRFBP1Q8NEF9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SRFBP1Q8NEF9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 KRT18P68-201ENST00000392293 1000 ntBASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 AF201337.1-201ENST00000520239 748 ntBASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SRFBP1Q8NEF9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.36■□□□□ 0.69
SRFBP1Q8NEF9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRFBP1Q8NEF9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRFBP1Q8NEF9 AC010980.2-201ENST00000587099 1412 ntBASIC19.36■□□□□ 0.69
SRFBP1Q8NEF9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRFBP1Q8NEF9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRFBP1Q8NEF9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRFBP1Q8NEF9 MIR663A-201ENST00000385250 93 ntBASIC19.36■□□□□ 0.69
SRFBP1Q8NEF9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SRFBP1Q8NEF9 AC006970.2-201ENST00000450065 779 ntBASIC19.36■□□□□ 0.69
SRFBP1Q8NEF9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.36■□□□□ 0.69
SRFBP1Q8NEF9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms