Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPEB3Q8NE35 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPEB3Q8NE35 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CPEB3Q8NE35 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPEB3Q8NE35 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPEB3Q8NE35 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CPEB3Q8NE35 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CPEB3Q8NE35 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CPEB3Q8NE35 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPEB3Q8NE35 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPEB3Q8NE35 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPEB3Q8NE35 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CPEB3Q8NE35 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CPEB3Q8NE35 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPEB3Q8NE35 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CPEB3Q8NE35 FEM1AP1-201ENST00000431297 1995 ntBASIC17.8■□□□□ 0.44
CPEB3Q8NE35 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPEB3Q8NE35 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.8■□□□□ 0.44
CPEB3Q8NE35 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.8■□□□□ 0.44
CPEB3Q8NE35 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CPEB3Q8NE35 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.8■□□□□ 0.44
CPEB3Q8NE35 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPEB3Q8NE35 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.8■□□□□ 0.44
CPEB3Q8NE35 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.8■□□□□ 0.44
CPEB3Q8NE35 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPEB3Q8NE35 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CPEB3Q8NE35 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPEB3Q8NE35 MIR663A-201ENST00000385250 93 ntBASIC17.8■□□□□ 0.44
CPEB3Q8NE35 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.8■□□□□ 0.44
CPEB3Q8NE35 OR10C1-204ENST00000622521 1039 ntBASIC17.8■□□□□ 0.44
CPEB3Q8NE35 AC008694.1-202ENST00000636953 945 ntBASIC17.8■□□□□ 0.44
CPEB3Q8NE35 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPEB3Q8NE35 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPEB3Q8NE35 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CPEB3Q8NE35 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPEB3Q8NE35 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CPEB3Q8NE35 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CPEB3Q8NE35 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPEB3Q8NE35 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPEB3Q8NE35 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CPEB3Q8NE35 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPEB3Q8NE35 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.79■□□□□ 0.44
CPEB3Q8NE35 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.79■□□□□ 0.44
CPEB3Q8NE35 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.79■□□□□ 0.44
CPEB3Q8NE35 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPEB3Q8NE35 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.79■□□□□ 0.44
CPEB3Q8NE35 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.79■□□□□ 0.44
CPEB3Q8NE35 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.79■□□□□ 0.44
CPEB3Q8NE35 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.79■□□□□ 0.44
CPEB3Q8NE35 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.79■□□□□ 0.44
CPEB3Q8NE35 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPEB3Q8NE35 CYP21A1P-202ENST00000354927 1481 ntBASIC17.79■□□□□ 0.44
CPEB3Q8NE35 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CPEB3Q8NE35 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.79■□□□□ 0.44
CPEB3Q8NE35 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.79■□□□□ 0.44
CPEB3Q8NE35 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
CPEB3Q8NE35 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CPEB3Q8NE35 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPEB3Q8NE35 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CPEB3Q8NE35 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CPEB3Q8NE35 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CPEB3Q8NE35 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CPEB3Q8NE35 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPEB3Q8NE35 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPEB3Q8NE35 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPEB3Q8NE35 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.78■□□□□ 0.44
CPEB3Q8NE35 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CPEB3Q8NE35 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPEB3Q8NE35 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.78■□□□□ 0.44
CPEB3Q8NE35 AC093787.1-201ENST00000450396 207 ntBASIC17.78■□□□□ 0.44
CPEB3Q8NE35 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPEB3Q8NE35 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.78■□□□□ 0.44
CPEB3Q8NE35 AC133552.2-202ENST00000575694 574 ntBASIC17.78■□□□□ 0.44
CPEB3Q8NE35 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CPEB3Q8NE35 AC073314.1-201ENST00000568729 2216 ntBASIC17.78■□□□□ 0.44
CPEB3Q8NE35 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CPEB3Q8NE35 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
CPEB3Q8NE35 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.77■□□□□ 0.44
CPEB3Q8NE35 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CPEB3Q8NE35 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPEB3Q8NE35 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
CPEB3Q8NE35 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPEB3Q8NE35 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CPEB3Q8NE35 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.77■□□□□ 0.44
CPEB3Q8NE35 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CPEB3Q8NE35 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.77■□□□□ 0.44
CPEB3Q8NE35 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPEB3Q8NE35 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CPEB3Q8NE35 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CPEB3Q8NE35 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CPEB3Q8NE35 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPEB3Q8NE35 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPEB3Q8NE35 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CPEB3Q8NE35 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.77■□□□□ 0.44
CPEB3Q8NE35 AC100791.3-201ENST00000617619 330 ntBASIC17.77■□□□□ 0.44
CPEB3Q8NE35 AC010980.2-201ENST00000587099 1412 ntBASIC17.77■□□□□ 0.44
CPEB3Q8NE35 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.77■□□□□ 0.44
CPEB3Q8NE35 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.77■□□□□ 0.43
CPEB3Q8NE35 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CPEB3Q8NE35 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms