Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 AL158047.1-201ENST00000445918 881 ntBASIC24.03■■□□□ 1.44
SLC44A5Q8NCS7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC24.03■■□□□ 1.44
SLC44A5Q8NCS7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SLC44A5Q8NCS7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC24.03■■□□□ 1.44
SLC44A5Q8NCS7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SLC44A5Q8NCS7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
SLC44A5Q8NCS7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SLC44A5Q8NCS7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SLC44A5Q8NCS7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.03■■□□□ 1.44
SLC44A5Q8NCS7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SLC44A5Q8NCS7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC24.02■■□□□ 1.44
SLC44A5Q8NCS7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
SLC44A5Q8NCS7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC24.02■■□□□ 1.44
SLC44A5Q8NCS7 AC005229.4-201ENST00000610085 2198 ntBASIC24.02■■□□□ 1.44
SLC44A5Q8NCS7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SLC44A5Q8NCS7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SLC44A5Q8NCS7 AC093827.2-201ENST00000512654 315 ntBASIC24.02■■□□□ 1.44
SLC44A5Q8NCS7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC24.02■■□□□ 1.44
SLC44A5Q8NCS7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC24.02■■□□□ 1.44
SLC44A5Q8NCS7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC24.02■■□□□ 1.44
SLC44A5Q8NCS7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SLC44A5Q8NCS7 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SLC44A5Q8NCS7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC24.02■■□□□ 1.44
SLC44A5Q8NCS7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SLC44A5Q8NCS7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
SLC44A5Q8NCS7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC24.01■■□□□ 1.43
SLC44A5Q8NCS7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC24.01■■□□□ 1.43
SLC44A5Q8NCS7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.01■■□□□ 1.43
SLC44A5Q8NCS7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC24.01■■□□□ 1.43
SLC44A5Q8NCS7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SLC44A5Q8NCS7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SLC44A5Q8NCS7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
SLC44A5Q8NCS7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SLC44A5Q8NCS7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC24.01■■□□□ 1.43
SLC44A5Q8NCS7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
SLC44A5Q8NCS7 AC006557.6-201ENST00000623071 864 ntBASIC24.01■■□□□ 1.43
SLC44A5Q8NCS7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC24.01■■□□□ 1.43
SLC44A5Q8NCS7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SLC44A5Q8NCS7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC24.01■■□□□ 1.43
SLC44A5Q8NCS7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SLC44A5Q8NCS7 AL121603.2-201ENST00000557373 2117 ntBASIC24.01■■□□□ 1.43
SLC44A5Q8NCS7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SLC44A5Q8NCS7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SLC44A5Q8NCS7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SLC44A5Q8NCS7 KRT8P36-201ENST00000489121 1440 ntBASIC24.01■■□□□ 1.43
SLC44A5Q8NCS7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SLC44A5Q8NCS7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
SLC44A5Q8NCS7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SLC44A5Q8NCS7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SLC44A5Q8NCS7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SLC44A5Q8NCS7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
SLC44A5Q8NCS7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SLC44A5Q8NCS7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SLC44A5Q8NCS7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC24■■□□□ 1.43
SLC44A5Q8NCS7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SLC44A5Q8NCS7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC24■■□□□ 1.43
SLC44A5Q8NCS7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC24■■□□□ 1.43
SLC44A5Q8NCS7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC24■■□□□ 1.43
SLC44A5Q8NCS7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC24■■□□□ 1.43
SLC44A5Q8NCS7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC24■■□□□ 1.43
SLC44A5Q8NCS7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC24■■□□□ 1.43
SLC44A5Q8NCS7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SLC44A5Q8NCS7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC24■■□□□ 1.43
SLC44A5Q8NCS7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
SLC44A5Q8NCS7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SLC44A5Q8NCS7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SLC44A5Q8NCS7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.99■■□□□ 1.43
SLC44A5Q8NCS7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SLC44A5Q8NCS7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.99■■□□□ 1.43
SLC44A5Q8NCS7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.99■■□□□ 1.43
SLC44A5Q8NCS7 AC142381.4-202ENST00000563973 229 ntBASIC23.99■■□□□ 1.43
SLC44A5Q8NCS7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.99■■□□□ 1.43
SLC44A5Q8NCS7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SLC44A5Q8NCS7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC23.99■■□□□ 1.43
SLC44A5Q8NCS7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SLC44A5Q8NCS7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.99■■□□□ 1.43
SLC44A5Q8NCS7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SLC44A5Q8NCS7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC23.99■■□□□ 1.43
SLC44A5Q8NCS7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SLC44A5Q8NCS7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SLC44A5Q8NCS7 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SLC44A5Q8NCS7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.99■■□□□ 1.43
SLC44A5Q8NCS7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
SLC44A5Q8NCS7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SLC44A5Q8NCS7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SLC44A5Q8NCS7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
SLC44A5Q8NCS7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.98■■□□□ 1.43
SLC44A5Q8NCS7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SLC44A5Q8NCS7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
SLC44A5Q8NCS7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.98■■□□□ 1.43
SLC44A5Q8NCS7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.98■■□□□ 1.43
SLC44A5Q8NCS7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC23.98■■□□□ 1.43
SLC44A5Q8NCS7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
SLC44A5Q8NCS7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SLC44A5Q8NCS7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
SLC44A5Q8NCS7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
SLC44A5Q8NCS7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SLC44A5Q8NCS7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SLC44A5Q8NCS7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SLC44A5Q8NCS7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms