Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
CCDC146Q8IYE0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
CCDC146Q8IYE0 FEM1AP1-201ENST00000431297 1995 ntBASIC27.04■■□□□ 1.92
CCDC146Q8IYE0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CCDC146Q8IYE0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC27.04■■□□□ 1.92
CCDC146Q8IYE0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
CCDC146Q8IYE0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC27.03■■□□□ 1.92
CCDC146Q8IYE0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CCDC146Q8IYE0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CCDC146Q8IYE0 AL355802.2-201ENST00000402069 882 ntBASIC27.03■■□□□ 1.92
CCDC146Q8IYE0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CCDC146Q8IYE0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC27.03■■□□□ 1.92
CCDC146Q8IYE0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC27.03■■□□□ 1.92
CCDC146Q8IYE0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC27.03■■□□□ 1.92
CCDC146Q8IYE0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CCDC146Q8IYE0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC27.03■■□□□ 1.92
CCDC146Q8IYE0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC27.03■■□□□ 1.92
CCDC146Q8IYE0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC27.03■■□□□ 1.92
CCDC146Q8IYE0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
CCDC146Q8IYE0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
CCDC146Q8IYE0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
CCDC146Q8IYE0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC27.02■■□□□ 1.92
CCDC146Q8IYE0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CCDC146Q8IYE0 KRT8P36-201ENST00000489121 1440 ntBASIC27.02■■□□□ 1.92
CCDC146Q8IYE0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
CCDC146Q8IYE0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CCDC146Q8IYE0 SLC29A4P1-201ENST00000398760 971 ntBASIC27.02■■□□□ 1.92
CCDC146Q8IYE0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC27.02■■□□□ 1.92
CCDC146Q8IYE0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC27.02■■□□□ 1.92
CCDC146Q8IYE0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC27.02■■□□□ 1.92
CCDC146Q8IYE0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC27.02■■□□□ 1.92
CCDC146Q8IYE0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC27.02■■□□□ 1.92
CCDC146Q8IYE0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CCDC146Q8IYE0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CCDC146Q8IYE0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
CCDC146Q8IYE0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
CCDC146Q8IYE0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CCDC146Q8IYE0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CCDC146Q8IYE0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CCDC146Q8IYE0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CCDC146Q8IYE0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CCDC146Q8IYE0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC27.01■■□□□ 1.91
CCDC146Q8IYE0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC27.01■■□□□ 1.91
CCDC146Q8IYE0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
CCDC146Q8IYE0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CCDC146Q8IYE0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC27.01■■□□□ 1.91
CCDC146Q8IYE0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CCDC146Q8IYE0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC27■■□□□ 1.91
CCDC146Q8IYE0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CCDC146Q8IYE0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC27■■□□□ 1.91
CCDC146Q8IYE0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CCDC146Q8IYE0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC27■■□□□ 1.91
CCDC146Q8IYE0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC27■■□□□ 1.91
CCDC146Q8IYE0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
CCDC146Q8IYE0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
CCDC146Q8IYE0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CCDC146Q8IYE0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC27■■□□□ 1.91
CCDC146Q8IYE0 OR2A1-AS1-201ENST00000462305 773 ntBASIC27■■□□□ 1.91
CCDC146Q8IYE0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC27■■□□□ 1.91
CCDC146Q8IYE0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC27■■□□□ 1.91
CCDC146Q8IYE0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC27■■□□□ 1.91
CCDC146Q8IYE0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC27■■□□□ 1.91
CCDC146Q8IYE0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC27■■□□□ 1.91
CCDC146Q8IYE0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC27■■□□□ 1.91
CCDC146Q8IYE0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC27■■□□□ 1.91
CCDC146Q8IYE0 LINC01006-201ENST00000333319 2292 ntBASIC27■■□□□ 1.91
CCDC146Q8IYE0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CCDC146Q8IYE0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
CCDC146Q8IYE0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC26.99■■□□□ 1.91
CCDC146Q8IYE0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CCDC146Q8IYE0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CCDC146Q8IYE0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CCDC146Q8IYE0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
CCDC146Q8IYE0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CCDC146Q8IYE0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CCDC146Q8IYE0 AC105020.6-201ENST00000621523 1217 ntBASIC26.99■■□□□ 1.91
CCDC146Q8IYE0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CCDC146Q8IYE0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC26.99■■□□□ 1.91
CCDC146Q8IYE0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
CCDC146Q8IYE0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
CCDC146Q8IYE0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
CCDC146Q8IYE0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
CCDC146Q8IYE0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
CCDC146Q8IYE0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC26.98■■□□□ 1.91
CCDC146Q8IYE0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
CCDC146Q8IYE0 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC26.98■■□□□ 1.91
CCDC146Q8IYE0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CCDC146Q8IYE0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
CCDC146Q8IYE0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CCDC146Q8IYE0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CCDC146Q8IYE0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CCDC146Q8IYE0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
CCDC146Q8IYE0 LSM12P1-201ENST00000411836 588 ntBASIC26.97■■□□□ 1.91
CCDC146Q8IYE0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC26.97■■□□□ 1.91
CCDC146Q8IYE0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC26.97■■□□□ 1.91
CCDC146Q8IYE0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
CCDC146Q8IYE0 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC26.97■■□□□ 1.91
CCDC146Q8IYE0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CCDC146Q8IYE0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC26.97■■□□□ 1.91
CCDC146Q8IYE0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms