Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 KRT8P36-201ENST00000489121 1440 ntBASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.92■□□□□ 0.94
CDKL3Q8IVW4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKL3Q8IVW4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKL3Q8IVW4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKL3Q8IVW4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKL3Q8IVW4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.91■□□□□ 0.94
CDKL3Q8IVW4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKL3Q8IVW4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.91■□□□□ 0.94
CDKL3Q8IVW4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDKL3Q8IVW4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.91■□□□□ 0.94
CDKL3Q8IVW4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKL3Q8IVW4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKL3Q8IVW4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CDKL3Q8IVW4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.91■□□□□ 0.94
CDKL3Q8IVW4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.91■□□□□ 0.94
CDKL3Q8IVW4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.9■□□□□ 0.94
CDKL3Q8IVW4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDKL3Q8IVW4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDKL3Q8IVW4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.9■□□□□ 0.94
CDKL3Q8IVW4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDKL3Q8IVW4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDKL3Q8IVW4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDKL3Q8IVW4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.9■□□□□ 0.94
CDKL3Q8IVW4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.9■□□□□ 0.94
CDKL3Q8IVW4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.9■□□□□ 0.94
CDKL3Q8IVW4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDKL3Q8IVW4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
CDKL3Q8IVW4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDKL3Q8IVW4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.9■□□□□ 0.94
CDKL3Q8IVW4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.9■□□□□ 0.94
CDKL3Q8IVW4 AC137761.2-201ENST00000561729 223 ntBASIC20.9■□□□□ 0.94
CDKL3Q8IVW4 AC145350.3-201ENST00000569033 163 ntBASIC20.9■□□□□ 0.94
CDKL3Q8IVW4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CDKL3Q8IVW4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDKL3Q8IVW4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDKL3Q8IVW4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDKL3Q8IVW4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDKL3Q8IVW4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDKL3Q8IVW4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDKL3Q8IVW4 KRT18P5-201ENST00000436075 1291 ntBASIC20.89■□□□□ 0.93
CDKL3Q8IVW4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.89■□□□□ 0.93
CDKL3Q8IVW4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.89■□□□□ 0.93
CDKL3Q8IVW4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.89■□□□□ 0.93
CDKL3Q8IVW4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.89■□□□□ 0.93
CDKL3Q8IVW4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.89■□□□□ 0.93
CDKL3Q8IVW4 AL591742.1-201ENST00000604433 565 ntBASIC20.89■□□□□ 0.93
CDKL3Q8IVW4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDKL3Q8IVW4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.89■□□□□ 0.93
CDKL3Q8IVW4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.89■□□□□ 0.93
CDKL3Q8IVW4 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.89■□□□□ 0.93
CDKL3Q8IVW4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDKL3Q8IVW4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CDKL3Q8IVW4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDKL3Q8IVW4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDKL3Q8IVW4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDKL3Q8IVW4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDKL3Q8IVW4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDKL3Q8IVW4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 AC013268.1-206ENST00000638368 961 ntBASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 AC112229.1-201ENST00000639295 961 ntBASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 AC099778.1-201ENST00000568593 1911 ntBASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.88■□□□□ 0.93
CDKL3Q8IVW4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDKL3Q8IVW4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms