Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
CDKAL1Q5VV42 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDKAL1Q5VV42 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.31■■□□□ 1.16
CDKAL1Q5VV42 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDKAL1Q5VV42 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDKAL1Q5VV42 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDKAL1Q5VV42 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
CDKAL1Q5VV42 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.31■■□□□ 1.16
CDKAL1Q5VV42 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.31■■□□□ 1.16
CDKAL1Q5VV42 KRT18P61-201ENST00000585825 1298 ntBASIC22.31■■□□□ 1.16
CDKAL1Q5VV42 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.31■■□□□ 1.16
CDKAL1Q5VV42 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.31■■□□□ 1.16
CDKAL1Q5VV42 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDKAL1Q5VV42 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDKAL1Q5VV42 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.31■■□□□ 1.16
CDKAL1Q5VV42 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDKAL1Q5VV42 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.31■■□□□ 1.16
CDKAL1Q5VV42 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CDKAL1Q5VV42 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDKAL1Q5VV42 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC22.3■■□□□ 1.16
CDKAL1Q5VV42 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDKAL1Q5VV42 DPP3P2-201ENST00000416030 1696 ntBASIC22.3■■□□□ 1.16
CDKAL1Q5VV42 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDKAL1Q5VV42 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDKAL1Q5VV42 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDKAL1Q5VV42 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.3■■□□□ 1.16
CDKAL1Q5VV42 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
CDKAL1Q5VV42 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CDKAL1Q5VV42 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDKAL1Q5VV42 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.3■■□□□ 1.16
CDKAL1Q5VV42 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDKAL1Q5VV42 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22.3■■□□□ 1.16
CDKAL1Q5VV42 KRT18P14-201ENST00000534205 1250 ntBASIC22.3■■□□□ 1.16
CDKAL1Q5VV42 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.3■■□□□ 1.16
CDKAL1Q5VV42 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.3■■□□□ 1.16
CDKAL1Q5VV42 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.3■■□□□ 1.16
CDKAL1Q5VV42 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.3■■□□□ 1.16
CDKAL1Q5VV42 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.3■■□□□ 1.16
CDKAL1Q5VV42 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDKAL1Q5VV42 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDKAL1Q5VV42 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC22.29■■□□□ 1.16
CDKAL1Q5VV42 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDKAL1Q5VV42 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDKAL1Q5VV42 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDKAL1Q5VV42 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
CDKAL1Q5VV42 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDKAL1Q5VV42 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC22.29■■□□□ 1.16
CDKAL1Q5VV42 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC22.29■■□□□ 1.16
CDKAL1Q5VV42 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
CDKAL1Q5VV42 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
CDKAL1Q5VV42 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDKAL1Q5VV42 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDKAL1Q5VV42 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
CDKAL1Q5VV42 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDKAL1Q5VV42 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC22.29■■□□□ 1.16
CDKAL1Q5VV42 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC22.29■■□□□ 1.16
CDKAL1Q5VV42 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDKAL1Q5VV42 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDKAL1Q5VV42 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.28■■□□□ 1.16
CDKAL1Q5VV42 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDKAL1Q5VV42 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDKAL1Q5VV42 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDKAL1Q5VV42 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDKAL1Q5VV42 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CDKAL1Q5VV42 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC22.28■■□□□ 1.16
CDKAL1Q5VV42 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDKAL1Q5VV42 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC22.28■■□□□ 1.16
CDKAL1Q5VV42 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.28■■□□□ 1.16
CDKAL1Q5VV42 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.28■■□□□ 1.16
CDKAL1Q5VV42 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDKAL1Q5VV42 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC22.28■■□□□ 1.16
CDKAL1Q5VV42 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CDKAL1Q5VV42 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDKAL1Q5VV42 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.28■■□□□ 1.16
CDKAL1Q5VV42 AL691432.2-201ENST00000607222 2038 ntBASIC22.28■■□□□ 1.16
CDKAL1Q5VV42 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDKAL1Q5VV42 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.27■■□□□ 1.16
CDKAL1Q5VV42 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDKAL1Q5VV42 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDKAL1Q5VV42 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.27■■□□□ 1.16
CDKAL1Q5VV42 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.27■■□□□ 1.16
CDKAL1Q5VV42 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
CDKAL1Q5VV42 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.27■■□□□ 1.16
CDKAL1Q5VV42 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDKAL1Q5VV42 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.27■■□□□ 1.16
CDKAL1Q5VV42 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.27■■□□□ 1.16
CDKAL1Q5VV42 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDKAL1Q5VV42 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
CDKAL1Q5VV42 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
CDKAL1Q5VV42 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
CDKAL1Q5VV42 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDKAL1Q5VV42 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDKAL1Q5VV42 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDKAL1Q5VV42 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDKAL1Q5VV42 BX119927.1-201ENST00000636596 1552 ntBASIC22.26■■□□□ 1.15
CDKAL1Q5VV42 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CDKAL1Q5VV42 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDKAL1Q5VV42 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDKAL1Q5VV42 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDKAL1Q5VV42 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms