Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RAB38P57729 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.17■□□□□ 0.66
RAB38P57729 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.17■□□□□ 0.66
RAB38P57729 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB38P57729 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
RAB38P57729 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
RAB38P57729 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAB38P57729 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB38P57729 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.17■□□□□ 0.66
RAB38P57729 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB38P57729 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAB38P57729 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RAB38P57729 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RAB38P57729 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RAB38P57729 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RAB38P57729 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.16■□□□□ 0.66
RAB38P57729 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB38P57729 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.16■□□□□ 0.66
RAB38P57729 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.16■□□□□ 0.66
RAB38P57729 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
RAB38P57729 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB38P57729 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB38P57729 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAB38P57729 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RAB38P57729 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB38P57729 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB38P57729 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAB38P57729 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB38P57729 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB38P57729 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB38P57729 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB38P57729 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB38P57729 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB38P57729 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB38P57729 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB38P57729 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB38P57729 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB38P57729 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB38P57729 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB38P57729 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB38P57729 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RAB38P57729 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.15■□□□□ 0.66
RAB38P57729 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB38P57729 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RAB38P57729 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB38P57729 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB38P57729 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.15■□□□□ 0.66
RAB38P57729 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB38P57729 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB38P57729 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RAB38P57729 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAB38P57729 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.15■□□□□ 0.66
RAB38P57729 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB38P57729 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAB38P57729 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RAB38P57729 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RAB38P57729 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB38P57729 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.14■□□□□ 0.65
RAB38P57729 DUSP5P2-201ENST00000426873 1033 ntBASIC19.14■□□□□ 0.65
RAB38P57729 AC073210.2-201ENST00000430369 194 ntBASIC19.14■□□□□ 0.65
RAB38P57729 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.14■□□□□ 0.65
RAB38P57729 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.14■□□□□ 0.65
RAB38P57729 AC133041.1-202ENST00000642053 222 ntBASIC19.14■□□□□ 0.65
RAB38P57729 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.14■□□□□ 0.65
RAB38P57729 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB38P57729 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB38P57729 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RAB38P57729 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.14■□□□□ 0.65
RAB38P57729 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAB38P57729 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RAB38P57729 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB38P57729 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RAB38P57729 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.13■□□□□ 0.65
RAB38P57729 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAB38P57729 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB38P57729 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RAB38P57729 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB38P57729 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RAB38P57729 AC069152.1-201ENST00000438030 544 ntBASIC19.13■□□□□ 0.65
RAB38P57729 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RAB38P57729 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.13■□□□□ 0.65
RAB38P57729 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.13■□□□□ 0.65
RAB38P57729 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.13■□□□□ 0.65
RAB38P57729 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.13■□□□□ 0.65
RAB38P57729 AC091874.3-201ENST00000512672 1195 ntBASIC19.13■□□□□ 0.65
RAB38P57729 AC098934.4-201ENST00000564127 592 ntBASIC19.13■□□□□ 0.65
RAB38P57729 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAB38P57729 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB38P57729 AC092720.2-201ENST00000602388 1665 ntBASIC19.13■□□□□ 0.65
RAB38P57729 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAB38P57729 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
RAB38P57729 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB38P57729 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB38P57729 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAB38P57729 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAB38P57729 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB38P57729 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.13■□□□□ 0.65
RAB38P57729 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAB38P57729 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAB38P57729 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms