Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PKNOX1P55347 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PKNOX1P55347 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PKNOX1P55347 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.92■□□□□ 0.78
PKNOX1P55347 AC104187.1-201ENST00000607510 612 ntBASIC19.92■□□□□ 0.78
PKNOX1P55347 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PKNOX1P55347 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.92■□□□□ 0.78
PKNOX1P55347 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PKNOX1P55347 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PKNOX1P55347 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PKNOX1P55347 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.92■□□□□ 0.78
PKNOX1P55347 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKNOX1P55347 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.91■□□□□ 0.78
PKNOX1P55347 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PKNOX1P55347 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PKNOX1P55347 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.91■□□□□ 0.78
PKNOX1P55347 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PKNOX1P55347 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKNOX1P55347 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKNOX1P55347 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKNOX1P55347 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKNOX1P55347 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.91■□□□□ 0.78
PKNOX1P55347 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKNOX1P55347 AP001160.3-201ENST00000601484 763 ntBASIC19.91■□□□□ 0.78
PKNOX1P55347 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PKNOX1P55347 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PKNOX1P55347 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKNOX1P55347 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PKNOX1P55347 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKNOX1P55347 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKNOX1P55347 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKNOX1P55347 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKNOX1P55347 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PKNOX1P55347 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PKNOX1P55347 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.91■□□□□ 0.78
PKNOX1P55347 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.91■□□□□ 0.78
PKNOX1P55347 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKNOX1P55347 AC116050.2-201ENST00000612102 1779 ntBASIC19.9■□□□□ 0.78
PKNOX1P55347 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PKNOX1P55347 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKNOX1P55347 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.9■□□□□ 0.78
PKNOX1P55347 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.9■□□□□ 0.78
PKNOX1P55347 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKNOX1P55347 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKNOX1P55347 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.9■□□□□ 0.78
PKNOX1P55347 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKNOX1P55347 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKNOX1P55347 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.9■□□□□ 0.78
PKNOX1P55347 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PKNOX1P55347 KRT18P20-201ENST00000548986 1279 ntBASIC19.9■□□□□ 0.78
PKNOX1P55347 TERF1P2-201ENST00000583350 1212 ntBASIC19.9■□□□□ 0.78
PKNOX1P55347 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
PKNOX1P55347 AC092720.2-201ENST00000602388 1665 ntBASIC19.9■□□□□ 0.78
PKNOX1P55347 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKNOX1P55347 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.9■□□□□ 0.78
PKNOX1P55347 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PKNOX1P55347 AL512408.1-201ENST00000569378 2000 ntBASIC19.9■□□□□ 0.78
PKNOX1P55347 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKNOX1P55347 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.9■□□□□ 0.78
PKNOX1P55347 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKNOX1P55347 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PKNOX1P55347 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
PKNOX1P55347 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PKNOX1P55347 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PKNOX1P55347 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PKNOX1P55347 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PKNOX1P55347 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PKNOX1P55347 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.89■□□□□ 0.77
PKNOX1P55347 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PKNOX1P55347 MIR638-201ENST00000385237 100 ntBASIC19.89■□□□□ 0.77
PKNOX1P55347 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.89■□□□□ 0.77
PKNOX1P55347 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.89■□□□□ 0.77
PKNOX1P55347 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.89■□□□□ 0.77
PKNOX1P55347 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PKNOX1P55347 SLC7A5P2-201ENST00000553010 536 ntBASIC19.89■□□□□ 0.77
PKNOX1P55347 CCDC92B-201ENST00000575506 885 ntBASIC19.89■□□□□ 0.77
PKNOX1P55347 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.89■□□□□ 0.77
PKNOX1P55347 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PKNOX1P55347 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PKNOX1P55347 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKNOX1P55347 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PKNOX1P55347 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKNOX1P55347 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKNOX1P55347 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.88■□□□□ 0.77
PKNOX1P55347 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.88■□□□□ 0.77
PKNOX1P55347 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PKNOX1P55347 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKNOX1P55347 YBX1P1-201ENST00000445822 960 ntBASIC19.88■□□□□ 0.77
PKNOX1P55347 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.88■□□□□ 0.77
PKNOX1P55347 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PKNOX1P55347 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.88■□□□□ 0.77
PKNOX1P55347 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.88■□□□□ 0.77
PKNOX1P55347 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKNOX1P55347 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKNOX1P55347 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKNOX1P55347 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PKNOX1P55347 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
PKNOX1P55347 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PKNOX1P55347 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PKNOX1P55347 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms