Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 tW(CCA)PtW(CCA)P 72 nt3.09□□□□□ -1.91
HDA1P53973 RPS22AYJL190C 393 nt3.09□□□□□ -1.91
HDA1P53973 JLP2YMR132C 627 nt3.09□□□□□ -1.91
HDA1P53973 YBL065WYBL065W 345 nt3.09□□□□□ -1.91
HDA1P53973 YPL182CYPL182C 384 nt3.09□□□□□ -1.91
HDA1P53973 IRC10YOL015W 1761 nt3.09□□□□□ -1.91
HDA1P53973 SPO14YKR031C 5052 nt3.09□□□□□ -1.92
HDA1P53973 SKT5YBL061C 2091 nt3.08□□□□□ -1.92
HDA1P53973 YCR018C-AYCR018C-A 255 nt3.08□□□□□ -1.92
HDA1P53973 YER189WYER189W 369 nt3.08□□□□□ -1.92
HDA1P53973 KAP104YBR017C 2757 nt3.07□□□□□ -1.92
HDA1P53973 snR70snR70 164 nt3.07□□□□□ -1.92
HDA1P53973 MZM1YDR493W 372 nt3.07□□□□□ -1.92
HDA1P53973 YGL149WYGL149W 306 nt3.07□□□□□ -1.92
HDA1P53973 TMA10YLR327C 261 nt3.07□□□□□ -1.92
HDA1P53973 TRM2YKR056W 1920 nt3.07□□□□□ -1.92
HDA1P53973 TSC11YER093C 4293 nt3.06□□□□□ -1.92
HDA1P53973 WIP1YDR374W-A 270 nt3.06□□□□□ -1.92
HDA1P53973 RPS24AYER074W 408 nt3.06□□□□□ -1.92
HDA1P53973 YGR265WYGR265W 411 nt3.06□□□□□ -1.92
HDA1P53973 AYR1YIL124W 894 nt3.06□□□□□ -1.92
HDA1P53973 HSK3YKL138C-A 210 nt3.06□□□□□ -1.92
HDA1P53973 SPO71YDR104C 3738 nt3.06□□□□□ -1.92
HDA1P53973 STT4YLR305C 5703 nt3.06□□□□□ -1.92
HDA1P53973 RPN1YHR027C 2982 nt3.05□□□□□ -1.92
HDA1P53973 YSP2YDR326C 4317 nt3.05□□□□□ -1.92
HDA1P53973 CDC24YAL041W 2565 nt3.05□□□□□ -1.92
HDA1P53973 RPL14BYHL001W 417 nt3.05□□□□□ -1.92
HDA1P53973 CCW14YLR390W-A 717 nt3.05□□□□□ -1.92
HDA1P53973 YLR458WYLR458W 381 nt3.05□□□□□ -1.92
HDA1P53973 AXL1YPR122W 3627 nt3.05□□□□□ -1.92
HDA1P53973 MET5YJR137C 4329 nt3.05□□□□□ -1.92
HDA1P53973 PRP8YHR165C 7242 nt3.05□□□□□ -1.92
HDA1P53973 IKI3YLR384C 4050 nt3.05□□□□□ -1.92
HDA1P53973 YOL057WYOL057W 2136 nt3.04□□□□□ -1.92
HDA1P53973 SMC2YFR031C 3513 nt3.04□□□□□ -1.92
HDA1P53973 TFC1YBR123C 1950 nt3.04□□□□□ -1.92
HDA1P53973 TIM11YDR322C-A 291 nt3.04□□□□□ -1.92
HDA1P53973 CYC7YEL039C 342 nt3.04□□□□□ -1.92
HDA1P53973 TAR1YLR154W-C 375 nt3.04□□□□□ -1.92
HDA1P53973 TRM7YBR061C 933 nt3.04□□□□□ -1.92
HDA1P53973 YOP1YPR028W 543 nt3.04□□□□□ -1.92
HDA1P53973 YPR146CYPR146C 330 nt3.04□□□□□ -1.92
HDA1P53973 AIM9YER080W 1884 nt3.04□□□□□ -1.92
HDA1P53973 BAS1YKR099W 2436 nt3.04□□□□□ -1.92
HDA1P53973 GIS4YML006C 2325 nt3.03□□□□□ -1.92
HDA1P53973 SLN1YIL147C 3663 nt3.03□□□□□ -1.92
HDA1P53973 Q0032Q0032 291 nt3.03□□□□□ -1.92
HDA1P53973 YJL020W-AYJL020W-A 258 nt3.03□□□□□ -1.92
HDA1P53973 RAM2YKL019W 951 nt3.03□□□□□ -1.92
HDA1P53973 YOR050CYOR050C 348 nt3.03□□□□□ -1.92
HDA1P53973 YOR072W-AYOR072W-A 249 nt3.03□□□□□ -1.92
HDA1P53973 YOR225WYOR225W 330 nt3.03□□□□□ -1.92
HDA1P53973 FLO1YAR050W 4614 nt3.03□□□□□ -1.92
HDA1P53973 PSO2YMR137C 1986 nt3.02□□□□□ -1.93
HDA1P53973 YHR032W-AYHR032W-A 180 nt3.02□□□□□ -1.93
HDA1P53973 RRM3YHR031C 2172 nt3.02□□□□□ -1.93
HDA1P53973 OSW7YFR039C 1533 nt3.02□□□□□ -1.93
HDA1P53973 SGO1YOR073W 1773 nt3.02□□□□□ -1.93
HDA1P53973 ESL1YIL151C 3357 nt3.01□□□□□ -1.93
HDA1P53973 LYS9YNR050C 1341 nt3.01□□□□□ -1.93
HDA1P53973 RPL35AYDL191W 363 nt3.01□□□□□ -1.93
HDA1P53973 YIL066W-AYIL066W-A 444 nt3.01□□□□□ -1.93
HDA1P53973 PHD1YKL043W 1101 nt3.01□□□□□ -1.93
HDA1P53973 RCY1YJL204C 2523 nt3.01□□□□□ -1.93
HDA1P53973 PUF4YGL014W 2667 nt3.01□□□□□ -1.93
HDA1P53973 YER121WYER121W 345 nt3□□□□□ -1.93
HDA1P53973 YGL188C-AYGL188C-A 141 nt3□□□□□ -1.93
HDA1P53973 TIM13YGR181W 318 nt3□□□□□ -1.93
HDA1P53973 BLI1YKL061W 342 nt3□□□□□ -1.93
HDA1P53973 YNL010WYNL010W 726 nt3□□□□□ -1.93
HDA1P53973 HCH1YNL281W 462 nt3□□□□□ -1.93
HDA1P53973 RPL36BYPL249C-A 303 nt3□□□□□ -1.93
HDA1P53973 YAT2YER024W 2772 nt3□□□□□ -1.93
HDA1P53973 PUF6YDR496C 1971 nt3□□□□□ -1.93
HDA1P53973 NAB3YPL190C 2409 nt2.99□□□□□ -1.93
HDA1P53973 YIL082W-AYIL082W-A 4497 nt2.99□□□□□ -1.93
HDA1P53973 YGL239CYGL239C 315 nt2.99□□□□□ -1.93
HDA1P53973 RPL40AYIL148W 387 nt2.99□□□□□ -1.93
HDA1P53973 RPL25YOL127W 429 nt2.99□□□□□ -1.93
HDA1P53973 NPR3YHL023C 3441 nt2.99□□□□□ -1.93
HDA1P53973 ASG1YIL130W 2895 nt2.97□□□□□ -1.93
HDA1P53973 LSO2YGR169C-A 279 nt2.97□□□□□ -1.93
HDA1P53973 YBR197CYBR197C 654 nt2.97□□□□□ -1.93
HDA1P53973 PSY2YNL201C 2577 nt2.97□□□□□ -1.93
HDA1P53973 YDL211CYDL211C 1119 nt2.96□□□□□ -1.94
HDA1P53973 YDR344CYDR344C 444 nt2.96□□□□□ -1.94
HDA1P53973 YGR069WYGR069W 336 nt2.96□□□□□ -1.94
HDA1P53973 YIL174WYIL174W 228 nt2.96□□□□□ -1.94
HDA1P53973 YJL222W-AYJL222W-A 228 nt2.96□□□□□ -1.94
HDA1P53973 YMR324CYMR324C 243 nt2.96□□□□□ -1.94
HDA1P53973 YPR099CYPR099C 357 nt2.96□□□□□ -1.94
HDA1P53973 YBR121C-AYBR121C-A 159 nt2.96□□□□□ -1.94
HDA1P53973 snR43snR43 209 nt2.96□□□□□ -1.94
HDA1P53973 TAO3YIL129C 7131 nt2.95□□□□□ -1.94
HDA1P53973 HTL1YCR020W-B 237 nt2.95□□□□□ -1.94
HDA1P53973 CSN9YDR179C 489 nt2.95□□□□□ -1.94
HDA1P53973 YER079C-AYER079C-A 339 nt2.95□□□□□ -1.94
HDA1P53973 RPS27AYKL156W 249 nt2.95□□□□□ -1.94
HDA1P53973 RPL32YBL092W 393 nt2.95□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 7.2 ms