Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
GTF2A1P52655 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GTF2A1P52655 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
GTF2A1P52655 AC008894.3-201ENST00000624324 3103 ntBASIC19.94■□□□□ 0.78
GTF2A1P52655 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GTF2A1P52655 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GTF2A1P52655 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GTF2A1P52655 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GTF2A1P52655 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GTF2A1P52655 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
GTF2A1P52655 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
GTF2A1P52655 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.94■□□□□ 0.78
GTF2A1P52655 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.94■□□□□ 0.78
GTF2A1P52655 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GTF2A1P52655 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
GTF2A1P52655 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
GTF2A1P52655 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
GTF2A1P52655 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
GTF2A1P52655 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GTF2A1P52655 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GTF2A1P52655 AC005332.7-201ENST00000614046 2005 ntBASIC19.93■□□□□ 0.78
GTF2A1P52655 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GTF2A1P52655 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GTF2A1P52655 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GTF2A1P52655 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
GTF2A1P52655 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
GTF2A1P52655 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GTF2A1P52655 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
GTF2A1P52655 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GTF2A1P52655 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
GTF2A1P52655 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
GTF2A1P52655 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GTF2A1P52655 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.93■□□□□ 0.78
GTF2A1P52655 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GTF2A1P52655 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GTF2A1P52655 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
GTF2A1P52655 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GTF2A1P52655 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.93■□□□□ 0.78
GTF2A1P52655 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
GTF2A1P52655 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
GTF2A1P52655 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
GTF2A1P52655 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
GTF2A1P52655 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
GTF2A1P52655 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
GTF2A1P52655 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
GTF2A1P52655 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
GTF2A1P52655 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
GTF2A1P52655 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
GTF2A1P52655 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GTF2A1P52655 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.92■□□□□ 0.78
GTF2A1P52655 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
GTF2A1P52655 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.92■□□□□ 0.78
GTF2A1P52655 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GTF2A1P52655 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
GTF2A1P52655 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
GTF2A1P52655 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
GTF2A1P52655 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GTF2A1P52655 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
GTF2A1P52655 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GTF2A1P52655 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.92■□□□□ 0.78
GTF2A1P52655 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GTF2A1P52655 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
GTF2A1P52655 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GTF2A1P52655 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
GTF2A1P52655 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
GTF2A1P52655 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF2A1P52655 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF2A1P52655 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF2A1P52655 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.91■□□□□ 0.78
GTF2A1P52655 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.91■□□□□ 0.78
GTF2A1P52655 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.91■□□□□ 0.78
GTF2A1P52655 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF2A1P52655 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF2A1P52655 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GTF2A1P52655 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.91■□□□□ 0.78
GTF2A1P52655 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
GTF2A1P52655 AC124067.4-201ENST00000519691 2379 ntBASIC19.91■□□□□ 0.78
GTF2A1P52655 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF2A1P52655 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF2A1P52655 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF2A1P52655 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF2A1P52655 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
GTF2A1P52655 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.91■□□□□ 0.78
GTF2A1P52655 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GTF2A1P52655 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF2A1P52655 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF2A1P52655 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF2A1P52655 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF2A1P52655 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GTF2A1P52655 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF2A1P52655 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF2A1P52655 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
GTF2A1P52655 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
GTF2A1P52655 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.91■□□□□ 0.78
GTF2A1P52655 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
GTF2A1P52655 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
GTF2A1P52655 AC027702.1-201ENST00000563810 1770 ntBASIC19.9■□□□□ 0.78
GTF2A1P52655 AL138781.2-201ENST00000617896 1843 ntBASIC19.9■□□□□ 0.78
GTF2A1P52655 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
GTF2A1P52655 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms