Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 VPS54YDR027C 2670 nt0.63□□□□□ -2.31
VPS55P47111 NUR1YDL089W 1455 nt0.63□□□□□ -2.31
VPS55P47111 YIL142C-AYIL142C-A 333 nt0.63□□□□□ -2.31
VPS55P47111 VPS25YJR102C 609 nt0.63□□□□□ -2.31
VPS55P47111 RAM2YKL019W 951 nt0.63□□□□□ -2.31
VPS55P47111 YMR175W-AYMR175W-A 195 nt0.63□□□□□ -2.31
VPS55P47111 YBR090CYBR090C 369 nt0.63□□□□□ -2.31
VPS55P47111 YPR117WYPR117W 7470 nt0.63□□□□□ -2.31
VPS55P47111 SLK19YOR195W 2466 nt0.63□□□□□ -2.31
VPS55P47111 SNF5YBR289W 2718 nt0.63□□□□□ -2.31
VPS55P47111 DAS1YJL149W 1992 nt0.63□□□□□ -2.31
VPS55P47111 CDC39YCR093W 6327 nt0.62□□□□□ -2.31
VPS55P47111 MUK1YPL070W 1839 nt0.62□□□□□ -2.31
VPS55P47111 SNF12YNR023W 1701 nt0.62□□□□□ -2.31
VPS55P47111 SLX9YGR081C 633 nt0.62□□□□□ -2.31
VPS55P47111 HTD2YHR067W 843 nt0.62□□□□□ -2.31
VPS55P47111 YJL032WYJL032W 315 nt0.62□□□□□ -2.31
VPS55P47111 YNL226WYNL226W 411 nt0.62□□□□□ -2.31
VPS55P47111 snR57snR57 88 nt0.61□□□□□ -2.31
VPS55P47111 YCR102W-AYCR102W-A 198 nt0.61□□□□□ -2.31
VPS55P47111 GPM2YDL021W 936 nt0.61□□□□□ -2.31
VPS55P47111 YML009C-AYML009C-A 327 nt0.61□□□□□ -2.31
VPS55P47111 FAR3YMR052W 615 nt0.61□□□□□ -2.31
VPS55P47111 YDR338CYDR338C 2088 nt0.6□□□□□ -2.31
VPS55P47111 MSC6YOR354C 2079 nt0.6□□□□□ -2.31
VPS55P47111 YDL211CYDL211C 1119 nt0.6□□□□□ -2.31
VPS55P47111 GIC2YDR309C 1152 nt0.6□□□□□ -2.31
VPS55P47111 YEL018C-AYEL018C-A 534 nt0.6□□□□□ -2.31
VPS55P47111 DUO1YGL061C 744 nt0.6□□□□□ -2.31
VPS55P47111 INA22YIR024C 651 nt0.6□□□□□ -2.31
VPS55P47111 TAP42YMR028W 1101 nt0.6□□□□□ -2.31
VPS55P47111 CUR1YPR158W 759 nt0.6□□□□□ -2.31
VPS55P47111 ERV15YBR210W 429 nt0.6□□□□□ -2.31
VPS55P47111 KAP120YPL125W 3099 nt0.6□□□□□ -2.31
VPS55P47111 OST1YJL002C 1431 nt0.59□□□□□ -2.31
VPS55P47111 MEI4YER044C-A 1227 nt0.59□□□□□ -2.31
VPS55P47111 COG7YGL005C 840 nt0.59□□□□□ -2.31
VPS55P47111 OST5YGL226C-A 261 nt0.59□□□□□ -2.31
VPS55P47111 PRS3YHL011C 963 nt0.59□□□□□ -2.31
VPS55P47111 GOS1YHL031C 672 nt0.59□□□□□ -2.31
VPS55P47111 YLL020CYLL020C 306 nt0.59□□□□□ -2.31
VPS55P47111 YET2YMR040W 483 nt0.59□□□□□ -2.31
VPS55P47111 TIF11YMR260C 462 nt0.59□□□□□ -2.31
VPS55P47111 ATX1YNL259C 222 nt0.59□□□□□ -2.31
VPS55P47111 YOR376WYOR376W 369 nt0.59□□□□□ -2.31
VPS55P47111 NSL1YPL233W 651 nt0.59□□□□□ -2.31
VPS55P47111 TRS20YBR254C 528 nt0.59□□□□□ -2.31
VPS55P47111 SMY1YKL079W 1971 nt0.58□□□□□ -2.32
VPS55P47111 NHP2YDL208W 471 nt0.58□□□□□ -2.32
VPS55P47111 YER088C-AYER088C-A 324 nt0.58□□□□□ -2.32
VPS55P47111 SPC1YJR010C-A 285 nt0.58□□□□□ -2.32
VPS55P47111 CMC4YMR194C-B 222 nt0.58□□□□□ -2.32
VPS55P47111 YOR072W-AYOR072W-A 249 nt0.58□□□□□ -2.32
VPS55P47111 SEC3YER008C 4011 nt0.57□□□□□ -2.32
VPS55P47111 RLM1YPL089C 2031 nt0.57□□□□□ -2.32
VPS55P47111 SLD5YDR489W 885 nt0.57□□□□□ -2.32
VPS55P47111 YDR521WYDR521W 336 nt0.57□□□□□ -2.32
VPS55P47111 YBL029C-AYBL029C-A 285 nt0.57□□□□□ -2.32
VPS55P47111 YMR178WYMR178W 825 nt0.57□□□□□ -2.32
VPS55P47111 FYV6YNL133C 522 nt0.57□□□□□ -2.32
VPS55P47111 YNR068CYNR068C 819 nt0.57□□□□□ -2.32
VPS55P47111 YBP2YGL060W 1926 nt0.57□□□□□ -2.32
VPS55P47111 SEC1YDR164C 2175 nt0.57□□□□□ -2.32
VPS55P47111 MUD2YKL074C 1584 nt0.57□□□□□ -2.32
VPS55P47111 MYO1YHR023W 5787 nt0.57□□□□□ -2.32
VPS55P47111 YHL009W-AYHL009W-A 1242 nt0.56□□□□□ -2.32
VPS55P47111 RPL16AYIL133C 600 nt0.56□□□□□ -2.32
VPS55P47111 HYR1YIR037W 492 nt0.56□□□□□ -2.32
VPS55P47111 YJL127C-BYJL127C-B 159 nt0.56□□□□□ -2.32
VPS55P47111 YAL064WYAL064W 285 nt0.56□□□□□ -2.32
VPS55P47111 YJR003CYJR003C 1560 nt0.56□□□□□ -2.32
VPS55P47111 YDR261W-AYDR261W-A 1317 nt0.56□□□□□ -2.32
VPS55P47111 SAS3YBL052C 2496 nt0.56□□□□□ -2.32
VPS55P47111 CDC27YBL084C 2277 nt0.55□□□□□ -2.32
VPS55P47111 SPR3YGR059W 1539 nt0.55□□□□□ -2.32
VPS55P47111 MAM1YER106W 909 nt0.55□□□□□ -2.32
VPS55P47111 COX6YHR051W 447 nt0.55□□□□□ -2.32
VPS55P47111 tT(AGU)BtT(AGU)B 73 nt0.55□□□□□ -2.32
VPS55P47111 tT(AGU)CtT(AGU)C 73 nt0.55□□□□□ -2.32
VPS55P47111 tT(AGU)DtT(AGU)D 73 nt0.55□□□□□ -2.32
VPS55P47111 tT(AGU)HtT(AGU)H 73 nt0.55□□□□□ -2.32
VPS55P47111 tT(AGU)I1tT(AGU)I1 73 nt0.55□□□□□ -2.32
VPS55P47111 tT(AGU)I2tT(AGU)I2 73 nt0.55□□□□□ -2.32
VPS55P47111 tT(AGU)JtT(AGU)J 73 nt0.55□□□□□ -2.32
VPS55P47111 tT(AGU)N1tT(AGU)N1 73 nt0.55□□□□□ -2.32
VPS55P47111 tT(AGU)N2tT(AGU)N2 73 nt0.55□□□□□ -2.32
VPS55P47111 tT(AGU)O1tT(AGU)O1 73 nt0.55□□□□□ -2.32
VPS55P47111 tT(AGU)O2tT(AGU)O2 73 nt0.55□□□□□ -2.32
VPS55P47111 NEJ1YLR265C 1029 nt0.55□□□□□ -2.32
VPS55P47111 ATP18YML081C-A 180 nt0.55□□□□□ -2.32
VPS55P47111 URA10YMR271C 684 nt0.55□□□□□ -2.32
VPS55P47111 YCS4YLR272C 3531 nt0.55□□□□□ -2.32
VPS55P47111 YMR160WYMR160W 2451 nt0.55□□□□□ -2.32
VPS55P47111 TMA20YER007C-A 546 nt0.54□□□□□ -2.32
VPS55P47111 YER023C-AYER023C-A 213 nt0.54□□□□□ -2.32
VPS55P47111 PFS1YHR185C 714 nt0.54□□□□□ -2.32
VPS55P47111 EMC5YIL027C 426 nt0.54□□□□□ -2.32
VPS55P47111 YOL085W-AYOL085W-A 213 nt0.54□□□□□ -2.32
VPS55P47111 MGR1YCL044C 1254 nt0.54□□□□□ -2.32
VPS55P47111 CCE1YKL011C 1062 nt0.53□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 21.2 ms