Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSR2P43308 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.42■□□□□ 0.7
SSR2P43308 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
SSR2P43308 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSR2P43308 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.42■□□□□ 0.7
SSR2P43308 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSR2P43308 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSR2P43308 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.42■□□□□ 0.7
SSR2P43308 AC073314.1-201ENST00000568729 2216 ntBASIC19.42■□□□□ 0.7
SSR2P43308 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSR2P43308 PGM5P4-201ENST00000421970 445 ntBASIC19.42■□□□□ 0.7
SSR2P43308 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSR2P43308 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSR2P43308 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.42■□□□□ 0.7
SSR2P43308 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSR2P43308 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SSR2P43308 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSR2P43308 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SSR2P43308 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSR2P43308 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSR2P43308 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSR2P43308 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSR2P43308 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SSR2P43308 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSR2P43308 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSR2P43308 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.41■□□□□ 0.7
SSR2P43308 AC092666.2-201ENST00000613287 246 ntBASIC19.41■□□□□ 0.7
SSR2P43308 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSR2P43308 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSR2P43308 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSR2P43308 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
SSR2P43308 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSR2P43308 CYP21A1P-202ENST00000354927 1481 ntBASIC19.41■□□□□ 0.7
SSR2P43308 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSR2P43308 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSR2P43308 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSR2P43308 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSR2P43308 LINC01006-201ENST00000333319 2292 ntBASIC19.4■□□□□ 0.7
SSR2P43308 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SSR2P43308 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSR2P43308 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SSR2P43308 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.4■□□□□ 0.7
SSR2P43308 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.4■□□□□ 0.7
SSR2P43308 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSR2P43308 CDCA4P2-201ENST00000441182 718 ntBASIC19.4■□□□□ 0.7
SSR2P43308 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.4■□□□□ 0.7
SSR2P43308 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.4■□□□□ 0.7
SSR2P43308 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSR2P43308 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.4■□□□□ 0.7
SSR2P43308 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.4■□□□□ 0.7
SSR2P43308 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSR2P43308 AP005212.1-201ENST00000581547 1997 ntBASIC19.4■□□□□ 0.7
SSR2P43308 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSR2P43308 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSR2P43308 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSR2P43308 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSR2P43308 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
SSR2P43308 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSR2P43308 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
SSR2P43308 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SSR2P43308 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SSR2P43308 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.39■□□□□ 0.69
SSR2P43308 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSR2P43308 AC026185.1-201ENST00000445748 174 ntBASIC19.39■□□□□ 0.69
SSR2P43308 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.39■□□□□ 0.69
SSR2P43308 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.39■□□□□ 0.69
SSR2P43308 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.39■□□□□ 0.69
SSR2P43308 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSR2P43308 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSR2P43308 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSR2P43308 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.39■□□□□ 0.69
SSR2P43308 AC087633.2-202ENST00000565166 1439 ntBASIC19.39■□□□□ 0.69
SSR2P43308 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.39■□□□□ 0.69
SSR2P43308 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSR2P43308 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.39■□□□□ 0.69
SSR2P43308 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSR2P43308 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSR2P43308 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SSR2P43308 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.39■□□□□ 0.69
SSR2P43308 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SSR2P43308 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.39■□□□□ 0.69
SSR2P43308 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SSR2P43308 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSR2P43308 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSR2P43308 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR2P43308 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR2P43308 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR2P43308 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SSR2P43308 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.38■□□□□ 0.69
SSR2P43308 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SSR2P43308 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR2P43308 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR2P43308 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR2P43308 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SSR2P43308 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR2P43308 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR2P43308 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSR2P43308 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
SSR2P43308 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.38■□□□□ 0.69
SSR2P43308 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms