Protein–RNA interactions for Protein: P42771

CDKN2A, Cyclin-dependent kinase inhibitor 2A, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2AP42771 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CDKN2AP42771 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2AP42771 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.18■□□□□ 0.5
CDKN2AP42771 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2AP42771 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.18■□□□□ 0.5
CDKN2AP42771 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2AP42771 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2AP42771 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2AP42771 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.18■□□□□ 0.5
CDKN2AP42771 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.18■□□□□ 0.5
CDKN2AP42771 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.18■□□□□ 0.5
CDKN2AP42771 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.18■□□□□ 0.5
CDKN2AP42771 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.18■□□□□ 0.5
CDKN2AP42771 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.18■□□□□ 0.5
CDKN2AP42771 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.18■□□□□ 0.5
CDKN2AP42771 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CDKN2AP42771 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CDKN2AP42771 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKN2AP42771 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CDKN2AP42771 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2AP42771 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2AP42771 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.17■□□□□ 0.5
CDKN2AP42771 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2AP42771 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2AP42771 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.17■□□□□ 0.5
CDKN2AP42771 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2AP42771 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2AP42771 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2AP42771 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.17■□□□□ 0.5
CDKN2AP42771 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2AP42771 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.17■□□□□ 0.5
CDKN2AP42771 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CDKN2AP42771 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2AP42771 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2AP42771 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2AP42771 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.17■□□□□ 0.5
CDKN2AP42771 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDKN2AP42771 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CDKN2AP42771 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2AP42771 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.16■□□□□ 0.5
CDKN2AP42771 KRT8P36-201ENST00000489121 1440 ntBASIC18.16■□□□□ 0.5
CDKN2AP42771 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2AP42771 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2AP42771 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CDKN2AP42771 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CDKN2AP42771 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.16■□□□□ 0.5
CDKN2AP42771 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.16■□□□□ 0.5
CDKN2AP42771 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.16■□□□□ 0.5
CDKN2AP42771 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2AP42771 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2AP42771 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.16■□□□□ 0.5
CDKN2AP42771 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2AP42771 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2AP42771 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2AP42771 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDKN2AP42771 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CDKN2AP42771 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.16■□□□□ 0.5
CDKN2AP42771 TCF3P1-201ENST00000423021 1937 ntBASIC18.15■□□□□ 0.5
CDKN2AP42771 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CDKN2AP42771 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDKN2AP42771 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CDKN2AP42771 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2AP42771 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2AP42771 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2AP42771 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2AP42771 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2AP42771 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.15■□□□□ 0.5
CDKN2AP42771 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2AP42771 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
CDKN2AP42771 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2AP42771 MYCNOS-205ENST00000641950 531 ntBASIC18.15■□□□□ 0.5
CDKN2AP42771 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2AP42771 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2AP42771 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKN2AP42771 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
CDKN2AP42771 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.14■□□□□ 0.5
CDKN2AP42771 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2AP42771 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.14■□□□□ 0.49
CDKN2AP42771 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2AP42771 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CDKN2AP42771 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2AP42771 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.14■□□□□ 0.49
CDKN2AP42771 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.14■□□□□ 0.49
CDKN2AP42771 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.14■□□□□ 0.49
CDKN2AP42771 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CDKN2AP42771 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.14■□□□□ 0.49
CDKN2AP42771 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CDKN2AP42771 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.14■□□□□ 0.49
CDKN2AP42771 NTF6G-201ENST00000591094 616 ntBASIC18.14■□□□□ 0.49
CDKN2AP42771 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.14■□□□□ 0.49
CDKN2AP42771 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDKN2AP42771 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CDKN2AP42771 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CDKN2AP42771 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2AP42771 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2AP42771 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2AP42771 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKN2AP42771 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2AP42771 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKN2AP42771 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms