Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.32■□□□□ 0.68
RPL3P39023 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RPL3P39023 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPL3P39023 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RPL3P39023 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RPL3P39023 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RPL3P39023 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPL3P39023 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPL3P39023 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RPL3P39023 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.31■□□□□ 0.68
RPL3P39023 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.31■□□□□ 0.68
RPL3P39023 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.31■□□□□ 0.68
RPL3P39023 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPL3P39023 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPL3P39023 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPL3P39023 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPL3P39023 AC034268.1-201ENST00000441047 882 ntBASIC19.31■□□□□ 0.68
RPL3P39023 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.31■□□□□ 0.68
RPL3P39023 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPL3P39023 UBE2DNL-204ENST00000602536 740 ntBASIC19.31■□□□□ 0.68
RPL3P39023 KRT8P36-201ENST00000489121 1440 ntBASIC19.31■□□□□ 0.68
RPL3P39023 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.31■□□□□ 0.68
RPL3P39023 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPL3P39023 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RPL3P39023 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RPL3P39023 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPL3P39023 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPL3P39023 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
RPL3P39023 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPL3P39023 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPL3P39023 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.3■□□□□ 0.68
RPL3P39023 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPL3P39023 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPL3P39023 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPL3P39023 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPL3P39023 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.3■□□□□ 0.68
RPL3P39023 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.3■□□□□ 0.68
RPL3P39023 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.3■□□□□ 0.68
RPL3P39023 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.3■□□□□ 0.68
RPL3P39023 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RPL3P39023 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
RPL3P39023 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RPL3P39023 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPL3P39023 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPL3P39023 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPL3P39023 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.3■□□□□ 0.68
RPL3P39023 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.3■□□□□ 0.68
RPL3P39023 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPL3P39023 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPL3P39023 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPL3P39023 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPL3P39023 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPL3P39023 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPL3P39023 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPL3P39023 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPL3P39023 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPL3P39023 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
RPL3P39023 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPL3P39023 KRT18P11-201ENST00000435214 1283 ntBASIC19.29■□□□□ 0.68
RPL3P39023 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.29■□□□□ 0.68
RPL3P39023 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPL3P39023 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.29■□□□□ 0.68
RPL3P39023 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RPL3P39023 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.29■□□□□ 0.68
RPL3P39023 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.29■□□□□ 0.68
RPL3P39023 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RPL3P39023 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.29■□□□□ 0.68
RPL3P39023 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.29■□□□□ 0.68
RPL3P39023 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.29■□□□□ 0.68
RPL3P39023 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RPL3P39023 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPL3P39023 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.29■□□□□ 0.68
RPL3P39023 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPL3P39023 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPL3P39023 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPL3P39023 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.28■□□□□ 0.68
RPL3P39023 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.28■□□□□ 0.68
RPL3P39023 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPL3P39023 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPL3P39023 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPL3P39023 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.28■□□□□ 0.68
RPL3P39023 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.28■□□□□ 0.68
RPL3P39023 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPL3P39023 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPL3P39023 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.28■□□□□ 0.68
RPL3P39023 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.28■□□□□ 0.68
RPL3P39023 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RPL3P39023 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RPL3P39023 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.28■□□□□ 0.68
RPL3P39023 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPL3P39023 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.28■□□□□ 0.68
RPL3P39023 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.28■□□□□ 0.68
RPL3P39023 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPL3P39023 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RPL3P39023 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPL3P39023 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.28■□□□□ 0.68
RPL3P39023 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPL3P39023 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPL3P39023 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPL3P39023 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms