Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC6A4P31645 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
SLC6A4P31645 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC6A4P31645 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC6A4P31645 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC6A4P31645 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SLC6A4P31645 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.95■□□□□ 0.94
SLC6A4P31645 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.95■□□□□ 0.94
SLC6A4P31645 UNC93B5-201ENST00000530315 699 ntBASIC20.95■□□□□ 0.94
SLC6A4P31645 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLC6A4P31645 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLC6A4P31645 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.95■□□□□ 0.94
SLC6A4P31645 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC6A4P31645 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC6A4P31645 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC6A4P31645 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.95■□□□□ 0.94
SLC6A4P31645 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC6A4P31645 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.94
SLC6A4P31645 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A4P31645 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SLC6A4P31645 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A4P31645 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A4P31645 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.94■□□□□ 0.94
SLC6A4P31645 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A4P31645 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A4P31645 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A4P31645 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SLC6A4P31645 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SLC6A4P31645 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.94■□□□□ 0.94
SLC6A4P31645 POU5F1P3-201ENST00000428824 1078 ntBASIC20.94■□□□□ 0.94
SLC6A4P31645 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.94■□□□□ 0.94
SLC6A4P31645 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SLC6A4P31645 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A4P31645 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A4P31645 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SLC6A4P31645 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
SLC6A4P31645 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.94■□□□□ 0.94
SLC6A4P31645 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.94■□□□□ 0.94
SLC6A4P31645 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A4P31645 FP700111.2-201ENST00000619190 1892 ntBASIC20.94■□□□□ 0.94
SLC6A4P31645 AC092368.3-202ENST00000574180 1591 ntBASIC20.93■□□□□ 0.94
SLC6A4P31645 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A4P31645 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC6A4P31645 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC6A4P31645 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A4P31645 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A4P31645 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A4P31645 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A4P31645 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC6A4P31645 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.93■□□□□ 0.94
SLC6A4P31645 PNMA6B-201ENST00000538162 1200 ntBASIC20.93■□□□□ 0.94
SLC6A4P31645 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A4P31645 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.93■□□□□ 0.94
SLC6A4P31645 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.93■□□□□ 0.94
SLC6A4P31645 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A4P31645 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC6A4P31645 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A4P31645 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC6A4P31645 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC6A4P31645 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A4P31645 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.92■□□□□ 0.94
SLC6A4P31645 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.92■□□□□ 0.94
SLC6A4P31645 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A4P31645 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A4P31645 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
SLC6A4P31645 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SLC6A4P31645 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SLC6A4P31645 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A4P31645 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A4P31645 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.92■□□□□ 0.94
SLC6A4P31645 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.92■□□□□ 0.94
SLC6A4P31645 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SLC6A4P31645 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A4P31645 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A4P31645 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.92■□□□□ 0.94
SLC6A4P31645 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A4P31645 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A4P31645 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A4P31645 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC6A4P31645 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
SLC6A4P31645 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC6A4P31645 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SLC6A4P31645 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SLC6A4P31645 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.91■□□□□ 0.94
SLC6A4P31645 ESRRAP1-201ENST00000400596 1257 ntBASIC20.91■□□□□ 0.94
SLC6A4P31645 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.91■□□□□ 0.94
SLC6A4P31645 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SLC6A4P31645 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC6A4P31645 FAM201B-201ENST00000458407 597 ntBASIC20.91■□□□□ 0.94
SLC6A4P31645 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.91■□□□□ 0.94
SLC6A4P31645 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.91■□□□□ 0.94
SLC6A4P31645 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC6A4P31645 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC6A4P31645 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC6A4P31645 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SLC6A4P31645 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SLC6A4P31645 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC6A4P31645 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A4P31645 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC6A4P31645 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms