Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTX3P26022 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
PTX3P26022 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTX3P26022 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.52■□□□□ 0.72
PTX3P26022 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTX3P26022 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTX3P26022 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PTX3P26022 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PTX3P26022 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTX3P26022 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTX3P26022 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTX3P26022 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.52■□□□□ 0.72
PTX3P26022 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTX3P26022 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.52■□□□□ 0.72
PTX3P26022 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTX3P26022 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PTX3P26022 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTX3P26022 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTX3P26022 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTX3P26022 AC092720.2-201ENST00000602388 1665 ntBASIC19.52■□□□□ 0.71
PTX3P26022 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
PTX3P26022 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
PTX3P26022 AC092667.1-201ENST00000434301 2586 ntBASIC19.51■□□□□ 0.71
PTX3P26022 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.51■□□□□ 0.71
PTX3P26022 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PTX3P26022 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTX3P26022 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PTX3P26022 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTX3P26022 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTX3P26022 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.51■□□□□ 0.71
PTX3P26022 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.51■□□□□ 0.71
PTX3P26022 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.51■□□□□ 0.71
PTX3P26022 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.51■□□□□ 0.71
PTX3P26022 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTX3P26022 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTX3P26022 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.51■□□□□ 0.71
PTX3P26022 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTX3P26022 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTX3P26022 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTX3P26022 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTX3P26022 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTX3P26022 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTX3P26022 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.51■□□□□ 0.71
PTX3P26022 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTX3P26022 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTX3P26022 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTX3P26022 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.5■□□□□ 0.71
PTX3P26022 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTX3P26022 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTX3P26022 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTX3P26022 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTX3P26022 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.5■□□□□ 0.71
PTX3P26022 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.5■□□□□ 0.71
PTX3P26022 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PTX3P26022 PGM5P4-201ENST00000421970 445 ntBASIC19.5■□□□□ 0.71
PTX3P26022 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.5■□□□□ 0.71
PTX3P26022 CNN2P6-201ENST00000439038 900 ntBASIC19.5■□□□□ 0.71
PTX3P26022 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.5■□□□□ 0.71
PTX3P26022 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.5■□□□□ 0.71
PTX3P26022 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.5■□□□□ 0.71
PTX3P26022 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTX3P26022 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.5■□□□□ 0.71
PTX3P26022 AC231657.2-201ENST00000624556 255 ntBASIC19.5■□□□□ 0.71
PTX3P26022 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PTX3P26022 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTX3P26022 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTX3P26022 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTX3P26022 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.5■□□□□ 0.71
PTX3P26022 KRT8P36-201ENST00000489121 1440 ntBASIC19.5■□□□□ 0.71
PTX3P26022 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PTX3P26022 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTX3P26022 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTX3P26022 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.49■□□□□ 0.71
PTX3P26022 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PTX3P26022 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.49■□□□□ 0.71
PTX3P26022 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTX3P26022 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTX3P26022 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.49■□□□□ 0.71
PTX3P26022 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.49■□□□□ 0.71
PTX3P26022 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTX3P26022 AC016405.3-201ENST00000607710 860 ntBASIC19.49■□□□□ 0.71
PTX3P26022 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PTX3P26022 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.49■□□□□ 0.71
PTX3P26022 AC068338.2-201ENST00000563278 1430 ntBASIC19.49■□□□□ 0.71
PTX3P26022 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.48■□□□□ 0.71
PTX3P26022 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.48■□□□□ 0.71
PTX3P26022 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PTX3P26022 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PTX3P26022 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTX3P26022 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.48■□□□□ 0.71
PTX3P26022 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PTX3P26022 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTX3P26022 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTX3P26022 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PTX3P26022 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTX3P26022 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PTX3P26022 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTX3P26022 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTX3P26022 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTX3P26022 AC007322.1-201ENST00000426983 750 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms