Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 TIM13YGR181W 318 nt3.44□□□□□ -1.86
MSH3P25336 RPL32YBL092W 393 nt3.44□□□□□ -1.86
MSH3P25336 MET10YFR030W 3108 nt3.44□□□□□ -1.86
MSH3P25336 HCS1YKL017C 2052 nt3.43□□□□□ -1.86
MSH3P25336 DBP6YNR038W 1890 nt3.43□□□□□ -1.86
MSH3P25336 FLO5YHR211W 3228 nt3.43□□□□□ -1.86
MSH3P25336 RAD61YDR014W 1944 nt3.43□□□□□ -1.86
MSH3P25336 RLF2YPR018W 1821 nt3.43□□□□□ -1.86
MSH3P25336 YIL102CYIL102C 306 nt3.43□□□□□ -1.86
MSH3P25336 PAM16YJL104W 450 nt3.43□□□□□ -1.86
MSH3P25336 YOL019W-AYOL019W-A 153 nt3.43□□□□□ -1.86
MSH3P25336 RPL20BYOR312C 519 nt3.43□□□□□ -1.86
MSH3P25336 snR42snR42 351 nt3.43□□□□□ -1.86
MSH3P25336 YIL166CYIL166C 1629 nt3.43□□□□□ -1.86
MSH3P25336 KAP104YBR017C 2757 nt3.43□□□□□ -1.86
MSH3P25336 SPO14YKR031C 5052 nt3.43□□□□□ -1.86
MSH3P25336 PAU10YDR542W 363 nt3.42□□□□□ -1.86
MSH3P25336 PAU11YGL261C 363 nt3.42□□□□□ -1.86
MSH3P25336 AYR1YIL124W 894 nt3.42□□□□□ -1.86
MSH3P25336 YJL222W-BYJL222W-B 138 nt3.42□□□□□ -1.86
MSH3P25336 YLR154C-HYLR154C-H 132 nt3.42□□□□□ -1.86
MSH3P25336 YLR156C-AYLR156C-A 132 nt3.42□□□□□ -1.86
MSH3P25336 YLR157C-CYLR157C-C 132 nt3.42□□□□□ -1.86
MSH3P25336 YLR159C-AYLR159C-A 132 nt3.42□□□□□ -1.86
MSH3P25336 YBL008W-AYBL008W-A 240 nt3.42□□□□□ -1.86
MSH3P25336 PAU4YLR461W 363 nt3.42□□□□□ -1.86
MSH3P25336 YLR466C-BYLR466C-B 117 nt3.42□□□□□ -1.86
MSH3P25336 TFC1YBR123C 1950 nt3.42□□□□□ -1.86
MSH3P25336 CHS2YBR038W 2892 nt3.41□□□□□ -1.86
MSH3P25336 YAT2YER024W 2772 nt3.41□□□□□ -1.86
MSH3P25336 STE6YKL209C 3873 nt3.41□□□□□ -1.86
MSH3P25336 BOI1YBL085W 2943 nt3.4□□□□□ -1.86
MSH3P25336 YTA7YGR270W 4140 nt3.4□□□□□ -1.86
MSH3P25336 PFD1YJL179W 330 nt3.4□□□□□ -1.87
MSH3P25336 SPB1YCL054W 2526 nt3.4□□□□□ -1.87
MSH3P25336 DBP7YKR024C 2229 nt3.4□□□□□ -1.87
MSH3P25336 MDV1YJL112W 2145 nt3.4□□□□□ -1.87
MSH3P25336 YGR151CYGR151C 336 nt3.39□□□□□ -1.87
MSH3P25336 YHL042WYHL042W 453 nt3.39□□□□□ -1.87
MSH3P25336 RPL40AYIL148W 387 nt3.39□□□□□ -1.87
MSH3P25336 UBP14YBR058C 2346 nt3.39□□□□□ -1.87
MSH3P25336 COG8YML071C 1824 nt3.39□□□□□ -1.87
MSH3P25336 SMC2YFR031C 3513 nt3.39□□□□□ -1.87
MSH3P25336 FLO1YAR050W 4614 nt3.38□□□□□ -1.87
MSH3P25336 YBR064WYBR064W 429 nt3.38□□□□□ -1.87
MSH3P25336 EPL1YFL024C 2499 nt3.38□□□□□ -1.87
MSH3P25336 FLO11YIR019C 4104 nt3.38□□□□□ -1.87
MSH3P25336 DIA2YOR080W 2199 nt3.38□□□□□ -1.87
MSH3P25336 NTO1YPR031W 2247 nt3.38□□□□□ -1.87
MSH3P25336 APC2YLR127C 2562 nt3.37□□□□□ -1.87
MSH3P25336 tQ(UUG)BtQ(UUG)B 72 nt3.37□□□□□ -1.87
MSH3P25336 YIL032CYIL032C 357 nt3.37□□□□□ -1.87
MSH3P25336 RAM2YKL019W 951 nt3.37□□□□□ -1.87
MSH3P25336 IES4YOR189W 351 nt3.37□□□□□ -1.87
MSH3P25336 ESL1YIL151C 3357 nt3.37□□□□□ -1.87
MSH3P25336 YMR324CYMR324C 243 nt3.36□□□□□ -1.87
MSH3P25336 SOK1YDR006C 2706 nt3.36□□□□□ -1.87
MSH3P25336 PSO2YMR137C 1986 nt3.36□□□□□ -1.87
MSH3P25336 RIM20YOR275C 1986 nt3.36□□□□□ -1.87
MSH3P25336 GCD6YDR211W 2139 nt3.35□□□□□ -1.87
MSH3P25336 CHO2YGR157W 2610 nt3.35□□□□□ -1.87
MSH3P25336 DIS3YOL021C 3006 nt3.35□□□□□ -1.87
MSH3P25336 YDR193WYDR193W 399 nt3.35□□□□□ -1.87
MSH3P25336 ATP8Q0080 147 nt3.35□□□□□ -1.87
MSH3P25336 YER189WYER189W 369 nt3.35□□□□□ -1.87
MSH3P25336 YLR053CYLR053C 327 nt3.35□□□□□ -1.87
MSH3P25336 YMR230W-AYMR230W-A 189 nt3.35□□□□□ -1.87
MSH3P25336 PSK2YOL045W 3306 nt3.34□□□□□ -1.87
MSH3P25336 FRE2YKL220C 2136 nt3.34□□□□□ -1.87
MSH3P25336 RPA34YJL148W 702 nt3.34□□□□□ -1.87
MSH3P25336 RPL36AYMR194W 303 nt3.34□□□□□ -1.87
MSH3P25336 YOR011W-AYOR011W-A 207 nt3.34□□□□□ -1.87
MSH3P25336 YOR073W-AYOR073W-A 234 nt3.34□□□□□ -1.87
MSH3P25336 YBR121C-AYBR121C-A 159 nt3.34□□□□□ -1.87
MSH3P25336 PUF6YDR496C 1971 nt3.33□□□□□ -1.88
MSH3P25336 snR55snR55 98 nt3.33□□□□□ -1.88
MSH3P25336 TIM11YDR322C-A 291 nt3.33□□□□□ -1.88
MSH3P25336 RPS27AYKL156W 249 nt3.33□□□□□ -1.88
MSH3P25336 NMD2YHR077C 3270 nt3.32□□□□□ -1.88
MSH3P25336 GIN4YDR507C 3429 nt3.32□□□□□ -1.88
MSH3P25336 QCR7YDR529C 384 nt3.32□□□□□ -1.88
MSH3P25336 CDC20YGL116W 1833 nt3.32□□□□□ -1.88
MSH3P25336 INP52YNL106C 3552 nt3.31□□□□□ -1.88
MSH3P25336 YOL057WYOL057W 2136 nt3.31□□□□□ -1.88
MSH3P25336 TRM2YKR056W 1920 nt3.31□□□□□ -1.88
MSH3P25336 LSO2YGR169C-A 279 nt3.31□□□□□ -1.88
MSH3P25336 RSN1YMR266W 2862 nt3.31□□□□□ -1.88
MSH3P25336 ATG13YPR185W 2217 nt3.31□□□□□ -1.88
MSH3P25336 KAR3YPR141C 2190 nt3.31□□□□□ -1.88
MSH3P25336 NPR3YHL023C 3441 nt3.31□□□□□ -1.88
MSH3P25336 ASG1YIL130W 2895 nt3.3□□□□□ -1.88
MSH3P25336 RBK1YCR036W 1002 nt3.3□□□□□ -1.88
MSH3P25336 YGL024WYGL024W 336 nt3.3□□□□□ -1.88
MSH3P25336 YNL010WYNL010W 726 nt3.3□□□□□ -1.88
MSH3P25336 SAR1YPL218W 573 nt3.3□□□□□ -1.88
MSH3P25336 YLL032CYLL032C 2478 nt3.3□□□□□ -1.88
MSH3P25336 HEH2YDR458C 1992 nt3.29□□□□□ -1.88
MSH3P25336 STE23YLR389C 3084 nt3.29□□□□□ -1.88
MSH3P25336 BAS1YKR099W 2436 nt3.29□□□□□ -1.88
MSH3P25336 YIL059CYIL059C 366 nt3.29□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 36.1 ms