Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.4■□□□□ 0.7
PRPH2P23942 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.4■□□□□ 0.7
PRPH2P23942 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.4■□□□□ 0.7
PRPH2P23942 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPH2P23942 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPH2P23942 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPH2P23942 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPH2P23942 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRPH2P23942 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.4■□□□□ 0.7
PRPH2P23942 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRPH2P23942 PGM5P4-201ENST00000421970 445 ntBASIC19.4■□□□□ 0.7
PRPH2P23942 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.4■□□□□ 0.7
PRPH2P23942 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.4■□□□□ 0.7
PRPH2P23942 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PRPH2P23942 MIR6821-201ENST00000617625 74 ntBASIC19.4■□□□□ 0.7
PRPH2P23942 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPH2P23942 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PRPH2P23942 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPH2P23942 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PRPH2P23942 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRPH2P23942 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPH2P23942 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPH2P23942 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PRPH2P23942 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPH2P23942 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPH2P23942 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.4■□□□□ 0.7
PRPH2P23942 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRPH2P23942 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PRPH2P23942 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.39■□□□□ 0.7
PRPH2P23942 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
PRPH2P23942 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPH2P23942 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.39■□□□□ 0.69
PRPH2P23942 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPH2P23942 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPH2P23942 KRT18P11-201ENST00000435214 1283 ntBASIC19.39■□□□□ 0.69
PRPH2P23942 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRPH2P23942 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRPH2P23942 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRPH2P23942 AL591742.1-201ENST00000604433 565 ntBASIC19.39■□□□□ 0.69
PRPH2P23942 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPH2P23942 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PRPH2P23942 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRPH2P23942 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PRPH2P23942 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPH2P23942 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.39■□□□□ 0.69
PRPH2P23942 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPH2P23942 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRPH2P23942 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRPH2P23942 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRPH2P23942 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.39■□□□□ 0.69
PRPH2P23942 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.39■□□□□ 0.69
PRPH2P23942 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.38■□□□□ 0.69
PRPH2P23942 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPH2P23942 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PRPH2P23942 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPH2P23942 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPH2P23942 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRPH2P23942 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PRPH2P23942 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPH2P23942 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PRPH2P23942 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRPH2P23942 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRPH2P23942 DPP3P2-201ENST00000416030 1696 ntBASIC19.38■□□□□ 0.69
PRPH2P23942 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPH2P23942 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRPH2P23942 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.38■□□□□ 0.69
PRPH2P23942 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRPH2P23942 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.38■□□□□ 0.69
PRPH2P23942 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.38■□□□□ 0.69
PRPH2P23942 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRPH2P23942 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PRPH2P23942 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRPH2P23942 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRPH2P23942 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRPH2P23942 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRPH2P23942 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRPH2P23942 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.37■□□□□ 0.69
PRPH2P23942 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.37■□□□□ 0.69
PRPH2P23942 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.37■□□□□ 0.69
PRPH2P23942 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRPH2P23942 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRPH2P23942 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
PRPH2P23942 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PRPH2P23942 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
PRPH2P23942 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.37■□□□□ 0.69
PRPH2P23942 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.37■□□□□ 0.69
PRPH2P23942 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.37■□□□□ 0.69
PRPH2P23942 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRPH2P23942 AL356652.1-201ENST00000615962 565 ntBASIC19.37■□□□□ 0.69
PRPH2P23942 AFG3L1P-217ENST00000557444 2447 ntBASIC19.37■□□□□ 0.69
PRPH2P23942 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRPH2P23942 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRPH2P23942 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRPH2P23942 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRPH2P23942 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.37■□□□□ 0.69
PRPH2P23942 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRPH2P23942 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRPH2P23942 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRPH2P23942 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRPH2P23942 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms