Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FAM228BP0C875 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
FAM228BP0C875 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FAM228BP0C875 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FAM228BP0C875 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.71■■□□□ 1.07
FAM228BP0C875 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FAM228BP0C875 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.71■■□□□ 1.07
FAM228BP0C875 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
FAM228BP0C875 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
FAM228BP0C875 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FAM228BP0C875 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FAM228BP0C875 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FAM228BP0C875 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
FAM228BP0C875 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.71■■□□□ 1.07
FAM228BP0C875 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.71■■□□□ 1.07
FAM228BP0C875 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FAM228BP0C875 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.71■■□□□ 1.07
FAM228BP0C875 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
FAM228BP0C875 AC007322.3-201ENST00000426526 701 ntBASIC21.71■■□□□ 1.07
FAM228BP0C875 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FAM228BP0C875 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.71■■□□□ 1.07
FAM228BP0C875 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.71■■□□□ 1.07
FAM228BP0C875 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.71■■□□□ 1.07
FAM228BP0C875 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
FAM228BP0C875 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.71■■□□□ 1.07
FAM228BP0C875 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.71■■□□□ 1.07
FAM228BP0C875 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FAM228BP0C875 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
FAM228BP0C875 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
FAM228BP0C875 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.71■■□□□ 1.07
FAM228BP0C875 KRT8P36-201ENST00000489121 1440 ntBASIC21.71■■□□□ 1.07
FAM228BP0C875 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FAM228BP0C875 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
FAM228BP0C875 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
FAM228BP0C875 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
FAM228BP0C875 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FAM228BP0C875 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.7■■□□□ 1.06
FAM228BP0C875 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
FAM228BP0C875 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
FAM228BP0C875 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
FAM228BP0C875 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
FAM228BP0C875 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
FAM228BP0C875 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.7■■□□□ 1.06
FAM228BP0C875 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
FAM228BP0C875 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.7■■□□□ 1.06
FAM228BP0C875 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
FAM228BP0C875 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.7■■□□□ 1.06
FAM228BP0C875 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.7■■□□□ 1.06
FAM228BP0C875 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FAM228BP0C875 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.7■■□□□ 1.06
FAM228BP0C875 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
FAM228BP0C875 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
FAM228BP0C875 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.7■■□□□ 1.06
FAM228BP0C875 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
FAM228BP0C875 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.7■■□□□ 1.06
FAM228BP0C875 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
FAM228BP0C875 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
FAM228BP0C875 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
FAM228BP0C875 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
FAM228BP0C875 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
FAM228BP0C875 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FAM228BP0C875 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.69■■□□□ 1.06
FAM228BP0C875 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.69■■□□□ 1.06
FAM228BP0C875 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FAM228BP0C875 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
FAM228BP0C875 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FAM228BP0C875 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.69■■□□□ 1.06
FAM228BP0C875 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.69■■□□□ 1.06
FAM228BP0C875 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.69■■□□□ 1.06
FAM228BP0C875 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
FAM228BP0C875 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.69■■□□□ 1.06
FAM228BP0C875 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.69■■□□□ 1.06
FAM228BP0C875 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FAM228BP0C875 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FAM228BP0C875 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.69■■□□□ 1.06
FAM228BP0C875 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.69■■□□□ 1.06
FAM228BP0C875 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FAM228BP0C875 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.69■■□□□ 1.06
FAM228BP0C875 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.69■■□□□ 1.06
FAM228BP0C875 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FAM228BP0C875 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
FAM228BP0C875 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.69■■□□□ 1.06
FAM228BP0C875 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
FAM228BP0C875 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FAM228BP0C875 AC125437.2-201ENST00000625180 2167 ntBASIC21.68■■□□□ 1.06
FAM228BP0C875 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FAM228BP0C875 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FAM228BP0C875 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FAM228BP0C875 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
FAM228BP0C875 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FAM228BP0C875 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FAM228BP0C875 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FAM228BP0C875 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FAM228BP0C875 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FAM228BP0C875 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FAM228BP0C875 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.68■■□□□ 1.06
FAM228BP0C875 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.68■■□□□ 1.06
FAM228BP0C875 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.68■■□□□ 1.06
FAM228BP0C875 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.68■■□□□ 1.06
FAM228BP0C875 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms