Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RETP07949 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.58■□□□□ 0.88
RETP07949 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.58■□□□□ 0.88
RETP07949 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
RETP07949 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RETP07949 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RETP07949 FAM99A-202ENST00000538190 1989 ntBASIC20.57■□□□□ 0.88
RETP07949 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RETP07949 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RETP07949 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RETP07949 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RETP07949 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RETP07949 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.57■□□□□ 0.88
RETP07949 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.57■□□□□ 0.88
RETP07949 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RETP07949 ARMC10P1-201ENST00000313754 855 ntBASIC20.57■□□□□ 0.88
RETP07949 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RETP07949 AC245052.3-201ENST00000450182 901 ntBASIC20.57■□□□□ 0.88
RETP07949 KRT18P35-201ENST00000510488 1269 ntBASIC20.57■□□□□ 0.88
RETP07949 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.57■□□□□ 0.88
RETP07949 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RETP07949 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RETP07949 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RETP07949 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.57■□□□□ 0.88
RETP07949 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RETP07949 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RETP07949 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RETP07949 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RETP07949 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RETP07949 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RETP07949 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RETP07949 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RETP07949 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RETP07949 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RETP07949 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RETP07949 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RETP07949 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RETP07949 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RETP07949 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RETP07949 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.55■□□□□ 0.88
RETP07949 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RETP07949 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.55■□□□□ 0.88
RETP07949 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RETP07949 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.55■□□□□ 0.88
RETP07949 AC113410.3-201ENST00000623366 203 ntBASIC20.55■□□□□ 0.88
RETP07949 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.55■□□□□ 0.88
RETP07949 AL023875.1-201ENST00000640777 796 ntBASIC20.55■□□□□ 0.88
RETP07949 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RETP07949 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RETP07949 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RETP07949 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RETP07949 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RETP07949 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.55■□□□□ 0.88
RETP07949 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RETP07949 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
RETP07949 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.54■□□□□ 0.88
RETP07949 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RETP07949 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RETP07949 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RETP07949 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RETP07949 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RETP07949 AC239809.2-201ENST00000415381 517 ntBASIC20.54■□□□□ 0.88
RETP07949 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.54■□□□□ 0.88
RETP07949 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.54■□□□□ 0.88
RETP07949 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
RETP07949 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.54■□□□□ 0.88
RETP07949 AC110285.5-201ENST00000611501 352 ntBASIC20.54■□□□□ 0.88
RETP07949 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RETP07949 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RETP07949 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RETP07949 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RETP07949 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RETP07949 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RETP07949 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.53■□□□□ 0.88
RETP07949 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RETP07949 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RETP07949 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RETP07949 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.53■□□□□ 0.88
RETP07949 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.53■□□□□ 0.88
RETP07949 AL355075.4-201ENST00000554988 638 ntBASIC20.53■□□□□ 0.88
RETP07949 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RETP07949 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.53■□□□□ 0.88
RETP07949 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RETP07949 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.53■□□□□ 0.88
RETP07949 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
RETP07949 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RETP07949 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.52■□□□□ 0.88
RETP07949 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.52■□□□□ 0.88
RETP07949 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RETP07949 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RETP07949 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RETP07949 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.52■□□□□ 0.88
RETP07949 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.52■□□□□ 0.88
RETP07949 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
RETP07949 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RETP07949 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.52■□□□□ 0.88
RETP07949 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RETP07949 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.52■□□□□ 0.88
RETP07949 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RETP07949 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms